RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
NECTIN3-208ENST00000486596 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
NECTIN3-208ENST00000486596 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
NECTIN3-208ENST00000486596 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
NECTIN3-208ENST00000486596 FOXD1Q16676 465 aa18.65■□□□□ 0.58
NECTIN3-208ENST00000486596 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
NECTIN3-208ENST00000486596 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
NECTIN3-208ENST00000486596 ADRA2BP18089 450 aa17.44■□□□□ 0.38
NECTIN3-208ENST00000486596 MSH5O43196 834 aa17.43■□□□□ 0.38
NECTIN3-208ENST00000486596 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
NECTIN3-208ENST00000486596 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
NECTIN3-208ENST00000486596 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
NECTIN3-208ENST00000486596 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
NECTIN3-208ENST00000486596 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
NECTIN3-208ENST00000486596 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
NECTIN3-208ENST00000486596 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
NECTIN3-208ENST00000486596 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
NECTIN3-208ENST00000486596 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
NECTIN3-208ENST00000486596 NISCHQ9Y2I1 1504 aa15.25■□□□□ 0.03
NECTIN3-208ENST00000486596 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
NECTIN3-208ENST00000486596 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
NECTIN3-208ENST00000486596 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
NECTIN3-208ENST00000486596 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
NECTIN3-208ENST00000486596 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
NECTIN3-208ENST00000486596 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
NECTIN3-208ENST00000486596 KCNA4P22459 653 aa14.73□□□□□ -0.05
NECTIN3-208ENST00000486596 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
NECTIN3-208ENST00000486596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
NECTIN3-208ENST00000486596 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
NECTIN3-208ENST00000486596 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
NECTIN3-208ENST00000486596 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
NECTIN3-208ENST00000486596 CAPN15O75808 1086 aa14□□□□□ -0.17
NECTIN3-208ENST00000486596 DSG3P32926 999 aa13.97□□□□□ -0.17
NECTIN3-208ENST00000486596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
NECTIN3-208ENST00000486596 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
NECTIN3-208ENST00000486596 APLP2Q06481 763 aa13.94□□□□□ -0.18
NECTIN3-208ENST00000486596 ABCC9O60706 1549 aa13.91□□□□□ -0.18
NECTIN3-208ENST00000486596 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
NECTIN3-208ENST00000486596 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
NECTIN3-208ENST00000486596 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
NECTIN3-208ENST00000486596 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
NECTIN3-208ENST00000486596 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
NECTIN3-208ENST00000486596 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
NECTIN3-208ENST00000486596 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
NECTIN3-208ENST00000486596 ABCB7O75027 752 aa13.67□□□□□ -0.22
NECTIN3-208ENST00000486596 ZBTB22O15209 634 aa13.55□□□□□ -0.24
NECTIN3-208ENST00000486596 POLA2Q14181 598 aa13.49□□□□□ -0.25
NECTIN3-208ENST00000486596 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
NECTIN3-208ENST00000486596 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
NECTIN3-208ENST00000486596 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
NECTIN3-208ENST00000486596 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
NECTIN3-208ENST00000486596 POTEHQ6S545 545 aa13.21□□□□□ -0.29
NECTIN3-208ENST00000486596 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
NECTIN3-208ENST00000486596 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
NECTIN3-208ENST00000486596 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
NECTIN3-208ENST00000486596 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
NECTIN3-208ENST00000486596 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
NECTIN3-208ENST00000486596 NACADO15069 1562 aa13.02□□□□□ -0.33
NECTIN3-208ENST00000486596 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
NECTIN3-208ENST00000486596 FBLN2P98095 1184 aa12.93□□□□□ -0.34
NECTIN3-208ENST00000486596 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
NECTIN3-208ENST00000486596 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
NECTIN3-208ENST00000486596 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
NECTIN3-208ENST00000486596 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
NECTIN3-208ENST00000486596 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
NECTIN3-208ENST00000486596 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
NECTIN3-208ENST00000486596 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
NECTIN3-208ENST00000486596 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
NECTIN3-208ENST00000486596 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
NECTIN3-208ENST00000486596 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
NECTIN3-208ENST00000486596 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
NECTIN3-208ENST00000486596 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
NECTIN3-208ENST00000486596 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
NECTIN3-208ENST00000486596 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
NECTIN3-208ENST00000486596 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
NECTIN3-208ENST00000486596 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
NECTIN3-208ENST00000486596 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
NECTIN3-208ENST00000486596 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.4
NECTIN3-208ENST00000486596 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
NECTIN3-208ENST00000486596 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
NECTIN3-208ENST00000486596 SCRIBQ14160 1630 aa12.55□□□□□ -0.4
NECTIN3-208ENST00000486596 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
NECTIN3-208ENST00000486596 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
NECTIN3-208ENST00000486596 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
NECTIN3-208ENST00000486596 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-208ENST00000486596 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
NECTIN3-208ENST00000486596 HAX1O00165 279 aa12.39□□□□□ -0.43
NECTIN3-208ENST00000486596 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
NECTIN3-208ENST00000486596 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
NECTIN3-208ENST00000486596 EVX2Q03828 476 aa12.29□□□□□ -0.44
NECTIN3-208ENST00000486596 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
NECTIN3-208ENST00000486596 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
NECTIN3-208ENST00000486596 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
NECTIN3-208ENST00000486596 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
NECTIN3-208ENST00000486596 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
NECTIN3-208ENST00000486596 PROM2Q8N271 834 aa12.1□□□□□ -0.47
NECTIN3-208ENST00000486596 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
NECTIN3-208ENST00000486596 CUX2O14529 1486 aa12.03□□□□□ -0.48
NECTIN3-208ENST00000486596 NCAPD3P42695 1498 aa12.02□□□□□ -0.48
NECTIN3-208ENST00000486596 GABBR2O75899 941 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms