RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
R3HDM1-217ENST00000486532 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
R3HDM1-217ENST00000486532 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
R3HDM1-217ENST00000486532 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
R3HDM1-217ENST00000486532 FOXD1Q16676 465 aa18.98■□□□□ 0.63
R3HDM1-217ENST00000486532 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
R3HDM1-217ENST00000486532 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
R3HDM1-217ENST00000486532 MSH5O43196 834 aa18.01■□□□□ 0.47
R3HDM1-217ENST00000486532 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
R3HDM1-217ENST00000486532 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
R3HDM1-217ENST00000486532 ADRA2BP18089 450 aa17.33■□□□□ 0.36
R3HDM1-217ENST00000486532 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
R3HDM1-217ENST00000486532 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
R3HDM1-217ENST00000486532 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
R3HDM1-217ENST00000486532 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
R3HDM1-217ENST00000486532 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
R3HDM1-217ENST00000486532 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
R3HDM1-217ENST00000486532 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
R3HDM1-217ENST00000486532 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
R3HDM1-217ENST00000486532 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
R3HDM1-217ENST00000486532 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
R3HDM1-217ENST00000486532 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
R3HDM1-217ENST00000486532 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
R3HDM1-217ENST00000486532 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
R3HDM1-217ENST00000486532 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
R3HDM1-217ENST00000486532 KCNA4P22459 653 aa14.74□□□□□ -0.05
R3HDM1-217ENST00000486532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.063e-7■□□□□ 8.6
R3HDM1-217ENST00000486532 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
R3HDM1-217ENST00000486532 POTEHQ6S545 545 aa14.23□□□□□ -0.13
R3HDM1-217ENST00000486532 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
R3HDM1-217ENST00000486532 APLP2Q06481 763 aa14.17□□□□□ -0.14
R3HDM1-217ENST00000486532 DSG3P32926 999 aa14.15□□□□□ -0.14
R3HDM1-217ENST00000486532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
R3HDM1-217ENST00000486532 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-217ENST00000486532 CAPN15O75808 1086 aa14.13□□□□□ -0.15
R3HDM1-217ENST00000486532 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
R3HDM1-217ENST00000486532 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
R3HDM1-217ENST00000486532 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
R3HDM1-217ENST00000486532 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
R3HDM1-217ENST00000486532 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
R3HDM1-217ENST00000486532 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
R3HDM1-217ENST00000486532 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
R3HDM1-217ENST00000486532 ABCB7O75027 752 aa13.73□□□□□ -0.21
R3HDM1-217ENST00000486532 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
R3HDM1-217ENST00000486532 POLA2Q14181 598 aa13.49□□□□□ -0.25
R3HDM1-217ENST00000486532 ZBTB22O15209 634 aa13.47□□□□□ -0.25
R3HDM1-217ENST00000486532 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
R3HDM1-217ENST00000486532 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
R3HDM1-217ENST00000486532 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
R3HDM1-217ENST00000486532 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-217ENST00000486532 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
R3HDM1-217ENST00000486532 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
R3HDM1-217ENST00000486532 FBLN2P98095 1184 aa13.11□□□□□ -0.31
R3HDM1-217ENST00000486532 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
R3HDM1-217ENST00000486532 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
R3HDM1-217ENST00000486532 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
R3HDM1-217ENST00000486532 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
R3HDM1-217ENST00000486532 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
R3HDM1-217ENST00000486532 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
R3HDM1-217ENST00000486532 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
R3HDM1-217ENST00000486532 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
R3HDM1-217ENST00000486532 HAX1O00165 279 aa12.87□□□□□ -0.35
R3HDM1-217ENST00000486532 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
R3HDM1-217ENST00000486532 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
R3HDM1-217ENST00000486532 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
R3HDM1-217ENST00000486532 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
R3HDM1-217ENST00000486532 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
R3HDM1-217ENST00000486532 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
R3HDM1-217ENST00000486532 EVX2Q03828 476 aa12.61□□□□□ -0.39
R3HDM1-217ENST00000486532 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
R3HDM1-217ENST00000486532 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
R3HDM1-217ENST00000486532 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
R3HDM1-217ENST00000486532 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
R3HDM1-217ENST00000486532 PRR29P0C7W0 189 aa12.44□□□□□ -0.42
R3HDM1-217ENST00000486532 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
R3HDM1-217ENST00000486532 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
R3HDM1-217ENST00000486532 GABBR2O75899 941 aa12.35□□□□□ -0.43
R3HDM1-217ENST00000486532 LHX8Q68G74 356 aa12.31□□□□□ -0.44
R3HDM1-217ENST00000486532 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
R3HDM1-217ENST00000486532 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
R3HDM1-217ENST00000486532 CLCN6P51797 869 aa12.12□□□□□ -0.47
R3HDM1-217ENST00000486532 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
R3HDM1-217ENST00000486532 PROM2Q8N271 834 aa12.09□□□□□ -0.47
R3HDM1-217ENST00000486532 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
R3HDM1-217ENST00000486532 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
R3HDM1-217ENST00000486532 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
R3HDM1-217ENST00000486532 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
R3HDM1-217ENST00000486532 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
R3HDM1-217ENST00000486532 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
R3HDM1-217ENST00000486532 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
R3HDM1-217ENST00000486532 FKBP8Q14318 412 aa11.91□□□□□ -0.5
R3HDM1-217ENST00000486532 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
R3HDM1-217ENST00000486532 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
R3HDM1-217ENST00000486532 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
R3HDM1-217ENST00000486532 MIER1Q8N108 512 aa11.84□□□□□ -0.51
R3HDM1-217ENST00000486532 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
R3HDM1-217ENST00000486532 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
R3HDM1-217ENST00000486532 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
R3HDM1-217ENST00000486532 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
R3HDM1-217ENST00000486532 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms