RNA–Protein interactions for RNA: ENST00000486471.1

ACTL6A-210, Transcript of actin like 6A, humanhuman

TSL 3

Gene ACTL6A, Length 1,077 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-210ENST00000486471 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
ACTL6A-210ENST00000486471 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
ACTL6A-210ENST00000486471 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
ACTL6A-210ENST00000486471 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
ACTL6A-210ENST00000486471 FOXD1Q16676 465 aa19.86■□□□□ 0.77
ACTL6A-210ENST00000486471 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
ACTL6A-210ENST00000486471 MSH5O43196 834 aa18.81■□□□□ 0.6
ACTL6A-210ENST00000486471 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
ACTL6A-210ENST00000486471 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
ACTL6A-210ENST00000486471 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
ACTL6A-210ENST00000486471 ADRA2BP18089 450 aa18.11■□□□□ 0.49
ACTL6A-210ENST00000486471 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
ACTL6A-210ENST00000486471 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
ACTL6A-210ENST00000486471 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
ACTL6A-210ENST00000486471 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
ACTL6A-210ENST00000486471 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
ACTL6A-210ENST00000486471 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
ACTL6A-210ENST00000486471 RNF39Q9H2S5 420 aa16■□□□□ 0.15
ACTL6A-210ENST00000486471 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
ACTL6A-210ENST00000486471 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
ACTL6A-210ENST00000486471 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
ACTL6A-210ENST00000486471 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
ACTL6A-210ENST00000486471 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
ACTL6A-210ENST00000486471 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
ACTL6A-210ENST00000486471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
ACTL6A-210ENST00000486471 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
ACTL6A-210ENST00000486471 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
ACTL6A-210ENST00000486471 POTEHQ6S545 545 aa14.84□□□□□ -0.03
ACTL6A-210ENST00000486471 DSG3P32926 999 aa14.81□□□□□ -0.04
ACTL6A-210ENST00000486471 CAPN15O75808 1086 aa14.75□□□□□ -0.05
ACTL6A-210ENST00000486471 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
ACTL6A-210ENST00000486471 APLP2Q06481 763 aa14.48□□□□□ -0.09
ACTL6A-210ENST00000486471 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
ACTL6A-210ENST00000486471 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
ACTL6A-210ENST00000486471 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
ACTL6A-210ENST00000486471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
ACTL6A-210ENST00000486471 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
ACTL6A-210ENST00000486471 ABCB7O75027 752 aa14.33□□□□□ -0.12
ACTL6A-210ENST00000486471 KCNA4P22459 653 aa14.31□□□□□ -0.12
ACTL6A-210ENST00000486471 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
ACTL6A-210ENST00000486471 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
ACTL6A-210ENST00000486471 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
ACTL6A-210ENST00000486471 POLA2Q14181 598 aa13.95□□□□□ -0.18
ACTL6A-210ENST00000486471 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
ACTL6A-210ENST00000486471 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
ACTL6A-210ENST00000486471 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
ACTL6A-210ENST00000486471 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
ACTL6A-210ENST00000486471 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
ACTL6A-210ENST00000486471 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
ACTL6A-210ENST00000486471 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
ACTL6A-210ENST00000486471 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
ACTL6A-210ENST00000486471 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
ACTL6A-210ENST00000486471 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
ACTL6A-210ENST00000486471 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
ACTL6A-210ENST00000486471 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
ACTL6A-210ENST00000486471 HAX1O00165 279 aa13.42□□□□□ -0.26
ACTL6A-210ENST00000486471 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
ACTL6A-210ENST00000486471 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
ACTL6A-210ENST00000486471 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
ACTL6A-210ENST00000486471 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
ACTL6A-210ENST00000486471 EVX2Q03828 476 aa13.21□□□□□ -0.29
ACTL6A-210ENST00000486471 ZBTB22O15209 634 aa13.15□□□□□ -0.3
ACTL6A-210ENST00000486471 FBLN2P98095 1184 aa13.13□□□□□ -0.31
ACTL6A-210ENST00000486471 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
ACTL6A-210ENST00000486471 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
ACTL6A-210ENST00000486471 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
ACTL6A-210ENST00000486471 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
ACTL6A-210ENST00000486471 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
ACTL6A-210ENST00000486471 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
ACTL6A-210ENST00000486471 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
ACTL6A-210ENST00000486471 GABBR2O75899 941 aa12.92□□□□□ -0.34
ACTL6A-210ENST00000486471 LHX8Q68G74 356 aa12.85□□□□□ -0.35
ACTL6A-210ENST00000486471 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
ACTL6A-210ENST00000486471 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
ACTL6A-210ENST00000486471 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
ACTL6A-210ENST00000486471 CLCN6P51797 869 aa12.69□□□□□ -0.38
ACTL6A-210ENST00000486471 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
ACTL6A-210ENST00000486471 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
ACTL6A-210ENST00000486471 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
ACTL6A-210ENST00000486471 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
ACTL6A-210ENST00000486471 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
ACTL6A-210ENST00000486471 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
ACTL6A-210ENST00000486471 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
ACTL6A-210ENST00000486471 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
ACTL6A-210ENST00000486471 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
ACTL6A-210ENST00000486471 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
ACTL6A-210ENST00000486471 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
ACTL6A-210ENST00000486471 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
ACTL6A-210ENST00000486471 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
ACTL6A-210ENST00000486471 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
ACTL6A-210ENST00000486471 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
ACTL6A-210ENST00000486471 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
ACTL6A-210ENST00000486471 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
ACTL6A-210ENST00000486471 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
ACTL6A-210ENST00000486471 POTEMA6NI47 508 aa12.1□□□□□ -0.47
ACTL6A-210ENST00000486471 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
ACTL6A-210ENST00000486471 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
ACTL6A-210ENST00000486471 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
ACTL6A-210ENST00000486471 PCDH10Q9P2E7 1040 aa12.04□□□□□ -0.48
ACTL6A-210ENST00000486471 C7P10643 843 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms