RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, humanhuman

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-222ENST00000486425 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
MUC4-222ENST00000486425 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
MUC4-222ENST00000486425 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
MUC4-222ENST00000486425 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
MUC4-222ENST00000486425 FOXD1Q16676 465 aa19.19■□□□□ 0.66
MUC4-222ENST00000486425 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
MUC4-222ENST00000486425 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
MUC4-222ENST00000486425 ADRA2BP18089 450 aa18.16■□□□□ 0.5
MUC4-222ENST00000486425 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
MUC4-222ENST00000486425 MSH5O43196 834 aa17.82■□□□□ 0.44
MUC4-222ENST00000486425 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
MUC4-222ENST00000486425 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
MUC4-222ENST00000486425 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
MUC4-222ENST00000486425 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
MUC4-222ENST00000486425 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
MUC4-222ENST00000486425 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
MUC4-222ENST00000486425 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
MUC4-222ENST00000486425 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
MUC4-222ENST00000486425 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
MUC4-222ENST00000486425 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
MUC4-222ENST00000486425 KCNA4P22459 653 aa15.8■□□□□ 0.12
MUC4-222ENST00000486425 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
MUC4-222ENST00000486425 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
MUC4-222ENST00000486425 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
MUC4-222ENST00000486425 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
MUC4-222ENST00000486425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
MUC4-222ENST00000486425 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
MUC4-222ENST00000486425 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
MUC4-222ENST00000486425 C1QBPQ07021 282 aaKnown RBP15.05■□□□□ -0
MUC4-222ENST00000486425 SLC4A2P04920 1241 aa15□□□□□ -0.01
MUC4-222ENST00000486425 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
MUC4-222ENST00000486425 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
MUC4-222ENST00000486425 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
MUC4-222ENST00000486425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
MUC4-222ENST00000486425 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
MUC4-222ENST00000486425 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
MUC4-222ENST00000486425 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
MUC4-222ENST00000486425 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
MUC4-222ENST00000486425 ZBTB22O15209 634 aa14.54□□□□□ -0.08
MUC4-222ENST00000486425 APLP2Q06481 763 aa14.54□□□□□ -0.08
MUC4-222ENST00000486425 CAPN15O75808 1086 aa14.52□□□□□ -0.09
MUC4-222ENST00000486425 ABCC9O60706 1549 aa14.51□□□□□ -0.09
MUC4-222ENST00000486425 ZCCHC6Q5VYS8 1495 aaKnown RBP14.4□□□□□ -0.1
MUC4-222ENST00000486425 DSG3P32926 999 aa14.39□□□□□ -0.11
MUC4-222ENST00000486425 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
MUC4-222ENST00000486425 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
MUC4-222ENST00000486425 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
MUC4-222ENST00000486425 ATF5Q9Y2D1 282 aaPredicted RBP14.24□□□□□ -0.13
MUC4-222ENST00000486425 ABCB7O75027 752 aa14.21□□□□□ -0.13
MUC4-222ENST00000486425 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
MUC4-222ENST00000486425 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
MUC4-222ENST00000486425 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
MUC4-222ENST00000486425 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
MUC4-222ENST00000486425 POLA2Q14181 598 aa14.1□□□□□ -0.15
MUC4-222ENST00000486425 NACADO15069 1562 aa13.94□□□□□ -0.18
MUC4-222ENST00000486425 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
MUC4-222ENST00000486425 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
MUC4-222ENST00000486425 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
MUC4-222ENST00000486425 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
MUC4-222ENST00000486425 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
MUC4-222ENST00000486425 FBLN2P98095 1184 aa13.65□□□□□ -0.22
MUC4-222ENST00000486425 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
MUC4-222ENST00000486425 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
MUC4-222ENST00000486425 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
MUC4-222ENST00000486425 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
MUC4-222ENST00000486425 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
MUC4-222ENST00000486425 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
MUC4-222ENST00000486425 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
MUC4-222ENST00000486425 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
MUC4-222ENST00000486425 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
MUC4-222ENST00000486425 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
MUC4-222ENST00000486425 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
MUC4-222ENST00000486425 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
MUC4-222ENST00000486425 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
MUC4-222ENST00000486425 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
MUC4-222ENST00000486425 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
MUC4-222ENST00000486425 POTEHQ6S545 545 aa13.21□□□□□ -0.29
MUC4-222ENST00000486425 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
MUC4-222ENST00000486425 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
MUC4-222ENST00000486425 RSF1Q96T23 1441 aaPredicted RBP13.17□□□□□ -0.3
MUC4-222ENST00000486425 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
MUC4-222ENST00000486425 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
MUC4-222ENST00000486425 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
MUC4-222ENST00000486425 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
MUC4-222ENST00000486425 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
MUC4-222ENST00000486425 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
MUC4-222ENST00000486425 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
MUC4-222ENST00000486425 WIZO95785 1651 aa13.11□□□□□ -0.31
MUC4-222ENST00000486425 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
MUC4-222ENST00000486425 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
MUC4-222ENST00000486425 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
MUC4-222ENST00000486425 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
MUC4-222ENST00000486425 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
MUC4-222ENST00000486425 TOP2AP11388 1531 aaKnown RBP13□□□□□ -0.33
MUC4-222ENST00000486425 SMARCA2P51531 1590 aa12.95□□□□□ -0.34
MUC4-222ENST00000486425 PROM2Q8N271 834 aa12.92□□□□□ -0.34
MUC4-222ENST00000486425 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
MUC4-222ENST00000486425 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
MUC4-222ENST00000486425 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
MUC4-222ENST00000486425 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms