RNA–Protein interactions for RNA: ENST00000485895.6

LCA5L-218, Transcript of LCA5L, lebercilin like, humanhuman

TSL 1 (best) BASIC

Gene LCA5L, Length 2,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-218ENST00000485895 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
LCA5L-218ENST00000485895 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
LCA5L-218ENST00000485895 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
LCA5L-218ENST00000485895 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
LCA5L-218ENST00000485895 ABCC9O60706 1549 aa15.95■□□□□ 0.14
LCA5L-218ENST00000485895 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
LCA5L-218ENST00000485895 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
LCA5L-218ENST00000485895 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
LCA5L-218ENST00000485895 CUX2O14529 1486 aa15.47■□□□□ 0.07
LCA5L-218ENST00000485895 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
LCA5L-218ENST00000485895 NISCHQ9Y2I1 1504 aa15.06■□□□□ 0
LCA5L-218ENST00000485895 SOCS7O14512 581 aa15□□□□□ -0.01
LCA5L-218ENST00000485895 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
LCA5L-218ENST00000485895 LMTK3Q96Q04 1460 aa14.8□□□□□ -0.04
LCA5L-218ENST00000485895 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
LCA5L-218ENST00000485895 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
LCA5L-218ENST00000485895 FOXD1Q16676 465 aa14.6□□□□□ -0.07
LCA5L-218ENST00000485895 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
LCA5L-218ENST00000485895 FBXO41Q8TF61 875 aa14.48□□□□□ -0.09
LCA5L-218ENST00000485895 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
LCA5L-218ENST00000485895 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
LCA5L-218ENST00000485895 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
LCA5L-218ENST00000485895 ILDR2Q71H61 639 aa14.2□□□□□ -0.14
LCA5L-218ENST00000485895 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
LCA5L-218ENST00000485895 ERCC6Q03468 1493 aa14.13□□□□□ -0.15
LCA5L-218ENST00000485895 RIMBP3CA6NJZ7 1639 aa14.09□□□□□ -0.15
LCA5L-218ENST00000485895 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
LCA5L-218ENST00000485895 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
LCA5L-218ENST00000485895 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
LCA5L-218ENST00000485895 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
LCA5L-218ENST00000485895 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
LCA5L-218ENST00000485895 DISP3Q9P2K9 1392 aa13.97□□□□□ -0.17
LCA5L-218ENST00000485895 NACADO15069 1562 aa13.97□□□□□ -0.17
LCA5L-218ENST00000485895 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
LCA5L-218ENST00000485895 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
LCA5L-218ENST00000485895 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
LCA5L-218ENST00000485895 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.2
LCA5L-218ENST00000485895 MSH5O43196 834 aa13.78□□□□□ -0.2
LCA5L-218ENST00000485895 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
LCA5L-218ENST00000485895 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
LCA5L-218ENST00000485895 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
LCA5L-218ENST00000485895 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
LCA5L-218ENST00000485895 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
LCA5L-218ENST00000485895 IFFO2Q5TF58 517 aa13.4□□□□□ -0.26
LCA5L-218ENST00000485895 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
LCA5L-218ENST00000485895 ARAP1Q96P48 1450 aa13.4□□□□□ -0.26
LCA5L-218ENST00000485895 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
LCA5L-218ENST00000485895 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
LCA5L-218ENST00000485895 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
LCA5L-218ENST00000485895 ADRA2BP18089 450 aa13.27□□□□□ -0.28
LCA5L-218ENST00000485895 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
LCA5L-218ENST00000485895 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
LCA5L-218ENST00000485895 KDM6BO15054 1643 aa13.08□□□□□ -0.32
LCA5L-218ENST00000485895 WDR62O43379 1518 aa13.05□□□□□ -0.32
LCA5L-218ENST00000485895 ADGRL1O94910 1474 aa13.01□□□□□ -0.33
LCA5L-218ENST00000485895 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
LCA5L-218ENST00000485895 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
LCA5L-218ENST00000485895 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
LCA5L-218ENST00000485895 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
LCA5L-218ENST00000485895 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
LCA5L-218ENST00000485895 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
LCA5L-218ENST00000485895 NESP48681 1621 aa12.9□□□□□ -0.34
LCA5L-218ENST00000485895 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
LCA5L-218ENST00000485895 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
LCA5L-218ENST00000485895 KIF13AQ9H1H9 1805 aa12.79□□□□□ -0.36
LCA5L-218ENST00000485895 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
LCA5L-218ENST00000485895 SLC34A2O95436 690 aa12.77□□□□□ -0.36
LCA5L-218ENST00000485895 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
LCA5L-218ENST00000485895 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
LCA5L-218ENST00000485895 HMGXB3Q12766 1538 aa12.58□□□□□ -0.39
LCA5L-218ENST00000485895 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
LCA5L-218ENST00000485895 CHD1O14646 1710 aa12.48□□□□□ -0.41
LCA5L-218ENST00000485895 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
LCA5L-218ENST00000485895 PCF11O94913 1555 aaKnown RBP12.47□□□□□ -0.41
LCA5L-218ENST00000485895 SNAPC4Q5SXM2 1469 aa12.44□□□□□ -0.42
LCA5L-218ENST00000485895 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
LCA5L-218ENST00000485895 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
LCA5L-218ENST00000485895 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
LCA5L-218ENST00000485895 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
LCA5L-218ENST00000485895 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
LCA5L-218ENST00000485895 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
LCA5L-218ENST00000485895 DIP2BQ9P265 1576 aa12.28□□□□□ -0.44
LCA5L-218ENST00000485895 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
LCA5L-218ENST00000485895 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
LCA5L-218ENST00000485895 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
LCA5L-218ENST00000485895 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
LCA5L-218ENST00000485895 PTPRTO14522 1441 aa12.18□□□□□ -0.46
LCA5L-218ENST00000485895 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
LCA5L-218ENST00000485895 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
LCA5L-218ENST00000485895 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
LCA5L-218ENST00000485895 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
LCA5L-218ENST00000485895 PTPRMP28827 1452 aa12.11□□□□□ -0.47
LCA5L-218ENST00000485895 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
LCA5L-218ENST00000485895 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
LCA5L-218ENST00000485895 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
LCA5L-218ENST00000485895 ZNF608Q9ULD9 1512 aaPredicted RBP12.05□□□□□ -0.48
LCA5L-218ENST00000485895 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
LCA5L-218ENST00000485895 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
LCA5L-218ENST00000485895 DCAF1Q9Y4B6 1507 aa11.95□□□□□ -0.5
LCA5L-218ENST00000485895 TSPOAP1O95153 1857 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms