RNA–Protein interactions for RNA: ENST00000485865.1

SETD4-216, Transcript of SET domain containing 4, humanhuman

TSL 2

Gene SETD4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-216ENST00000485865 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
SETD4-216ENST00000485865 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
SETD4-216ENST00000485865 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SETD4-216ENST00000485865 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
SETD4-216ENST00000485865 FOXD1Q16676 465 aa16.77■□□□□ 0.28
SETD4-216ENST00000485865 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
SETD4-216ENST00000485865 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
SETD4-216ENST00000485865 MSH5O43196 834 aa15.74■□□□□ 0.11
SETD4-216ENST00000485865 ADRA2BP18089 450 aa15.72■□□□□ 0.11
SETD4-216ENST00000485865 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
SETD4-216ENST00000485865 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
SETD4-216ENST00000485865 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
SETD4-216ENST00000485865 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
SETD4-216ENST00000485865 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
SETD4-216ENST00000485865 NISCHQ9Y2I1 1504 aa14.17□□□□□ -0.14
SETD4-216ENST00000485865 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
SETD4-216ENST00000485865 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SETD4-216ENST00000485865 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
SETD4-216ENST00000485865 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
SETD4-216ENST00000485865 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
SETD4-216ENST00000485865 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
SETD4-216ENST00000485865 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
SETD4-216ENST00000485865 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
SETD4-216ENST00000485865 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
SETD4-216ENST00000485865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
SETD4-216ENST00000485865 KCNA4P22459 653 aa13.25□□□□□ -0.29
SETD4-216ENST00000485865 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
SETD4-216ENST00000485865 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
SETD4-216ENST00000485865 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
SETD4-216ENST00000485865 CAPN15O75808 1086 aa12.79□□□□□ -0.36
SETD4-216ENST00000485865 ABCC9O60706 1549 aa12.78□□□□□ -0.36
SETD4-216ENST00000485865 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
SETD4-216ENST00000485865 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
SETD4-216ENST00000485865 APLP2Q06481 763 aa12.68□□□□□ -0.38
SETD4-216ENST00000485865 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
SETD4-216ENST00000485865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
SETD4-216ENST00000485865 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
SETD4-216ENST00000485865 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
SETD4-216ENST00000485865 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
SETD4-216ENST00000485865 DSG3P32926 999 aa12.55□□□□□ -0.4
SETD4-216ENST00000485865 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
SETD4-216ENST00000485865 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
SETD4-216ENST00000485865 ABCB7O75027 752 aa12.48□□□□□ -0.41
SETD4-216ENST00000485865 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
SETD4-216ENST00000485865 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
SETD4-216ENST00000485865 POLA2Q14181 598 aa12.2□□□□□ -0.46
SETD4-216ENST00000485865 ZBTB22O15209 634 aa12.11□□□□□ -0.47
SETD4-216ENST00000485865 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
SETD4-216ENST00000485865 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SETD4-216ENST00000485865 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
SETD4-216ENST00000485865 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
SETD4-216ENST00000485865 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
SETD4-216ENST00000485865 NACADO15069 1562 aa11.96□□□□□ -0.5
SETD4-216ENST00000485865 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
SETD4-216ENST00000485865 POTEHQ6S545 545 aa11.95□□□□□ -0.5
SETD4-216ENST00000485865 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
SETD4-216ENST00000485865 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SETD4-216ENST00000485865 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
SETD4-216ENST00000485865 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
SETD4-216ENST00000485865 FBLN2P98095 1184 aa11.78□□□□□ -0.52
SETD4-216ENST00000485865 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
SETD4-216ENST00000485865 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
SETD4-216ENST00000485865 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
SETD4-216ENST00000485865 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.53
SETD4-216ENST00000485865 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
SETD4-216ENST00000485865 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
SETD4-216ENST00000485865 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
SETD4-216ENST00000485865 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
SETD4-216ENST00000485865 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
SETD4-216ENST00000485865 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
SETD4-216ENST00000485865 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
SETD4-216ENST00000485865 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
SETD4-216ENST00000485865 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
SETD4-216ENST00000485865 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
SETD4-216ENST00000485865 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.57
SETD4-216ENST00000485865 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
SETD4-216ENST00000485865 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
SETD4-216ENST00000485865 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
SETD4-216ENST00000485865 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
SETD4-216ENST00000485865 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
SETD4-216ENST00000485865 SHROOM4Q9ULL8 1493 aa11.41□□□□□ -0.58
SETD4-216ENST00000485865 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
SETD4-216ENST00000485865 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
SETD4-216ENST00000485865 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
SETD4-216ENST00000485865 HAX1O00165 279 aa11.33□□□□□ -0.6
SETD4-216ENST00000485865 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
SETD4-216ENST00000485865 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
SETD4-216ENST00000485865 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
SETD4-216ENST00000485865 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
SETD4-216ENST00000485865 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
SETD4-216ENST00000485865 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
SETD4-216ENST00000485865 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
SETD4-216ENST00000485865 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
SETD4-216ENST00000485865 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
SETD4-216ENST00000485865 EVX2Q03828 476 aa11.03□□□□□ -0.64
SETD4-216ENST00000485865 NESP48681 1621 aa11.01□□□□□ -0.65
SETD4-216ENST00000485865 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
SETD4-216ENST00000485865 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
SETD4-216ENST00000485865 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
SETD4-216ENST00000485865 ERCC6Q03468 1493 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms