RNA–Protein interactions for RNA: ENST00000485605.1

CEACAM1-211, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5

Gene CEACAM1, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-211ENST00000485605 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
CEACAM1-211ENST00000485605 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
CEACAM1-211ENST00000485605 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
CEACAM1-211ENST00000485605 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
CEACAM1-211ENST00000485605 FOXD1Q16676 465 aa18.74■□□□□ 0.59
CEACAM1-211ENST00000485605 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
CEACAM1-211ENST00000485605 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
CEACAM1-211ENST00000485605 ADRA2BP18089 450 aa17.99■□□□□ 0.47
CEACAM1-211ENST00000485605 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
CEACAM1-211ENST00000485605 MSH5O43196 834 aa17.14■□□□□ 0.33
CEACAM1-211ENST00000485605 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
CEACAM1-211ENST00000485605 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
CEACAM1-211ENST00000485605 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
CEACAM1-211ENST00000485605 KCNA4P22459 653 aa16.21■□□□□ 0.19
CEACAM1-211ENST00000485605 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
CEACAM1-211ENST00000485605 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
CEACAM1-211ENST00000485605 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
CEACAM1-211ENST00000485605 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
CEACAM1-211ENST00000485605 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-211ENST00000485605 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-211ENST00000485605 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CEACAM1-211ENST00000485605 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
CEACAM1-211ENST00000485605 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
CEACAM1-211ENST00000485605 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
CEACAM1-211ENST00000485605 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
CEACAM1-211ENST00000485605 ZBTB22O15209 634 aa15.01□□□□□ -0.01
CEACAM1-211ENST00000485605 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
CEACAM1-211ENST00000485605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■□□□□ 8.2
CEACAM1-211ENST00000485605 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
CEACAM1-211ENST00000485605 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
CEACAM1-211ENST00000485605 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
CEACAM1-211ENST00000485605 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
CEACAM1-211ENST00000485605 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
CEACAM1-211ENST00000485605 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
CEACAM1-211ENST00000485605 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
CEACAM1-211ENST00000485605 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
CEACAM1-211ENST00000485605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
CEACAM1-211ENST00000485605 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
CEACAM1-211ENST00000485605 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
CEACAM1-211ENST00000485605 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
CEACAM1-211ENST00000485605 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-211ENST00000485605 APLP2Q06481 763 aa14.17□□□□□ -0.14
CEACAM1-211ENST00000485605 CAPN15O75808 1086 aa14.16□□□□□ -0.14
CEACAM1-211ENST00000485605 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
CEACAM1-211ENST00000485605 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
CEACAM1-211ENST00000485605 DSG3P32926 999 aa14.07□□□□□ -0.16
CEACAM1-211ENST00000485605 ABCB7O75027 752 aa13.98□□□□□ -0.17
CEACAM1-211ENST00000485605 POLA2Q14181 598 aa13.93□□□□□ -0.18
CEACAM1-211ENST00000485605 MKRN4PQ13434 485 aaPredicted RBP13.77□□□□□ -0.21
CEACAM1-211ENST00000485605 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
CEACAM1-211ENST00000485605 FBLN2P98095 1184 aa13.53□□□□□ -0.24
CEACAM1-211ENST00000485605 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
CEACAM1-211ENST00000485605 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
CEACAM1-211ENST00000485605 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
CEACAM1-211ENST00000485605 FKBP8Q14318 412 aa13.3□□□□□ -0.28
CEACAM1-211ENST00000485605 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
CEACAM1-211ENST00000485605 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
CEACAM1-211ENST00000485605 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
CEACAM1-211ENST00000485605 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
CEACAM1-211ENST00000485605 PROM2Q8N271 834 aa13.24□□□□□ -0.29
CEACAM1-211ENST00000485605 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-211ENST00000485605 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
CEACAM1-211ENST00000485605 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
CEACAM1-211ENST00000485605 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-211ENST00000485605 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
CEACAM1-211ENST00000485605 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
CEACAM1-211ENST00000485605 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
CEACAM1-211ENST00000485605 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
CEACAM1-211ENST00000485605 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
CEACAM1-211ENST00000485605 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
CEACAM1-211ENST00000485605 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
CEACAM1-211ENST00000485605 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
CEACAM1-211ENST00000485605 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
CEACAM1-211ENST00000485605 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
CEACAM1-211ENST00000485605 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
CEACAM1-211ENST00000485605 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
CEACAM1-211ENST00000485605 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
CEACAM1-211ENST00000485605 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
CEACAM1-211ENST00000485605 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
CEACAM1-211ENST00000485605 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
CEACAM1-211ENST00000485605 MIER1Q8N108 512 aa12.52□□□□□ -0.41
CEACAM1-211ENST00000485605 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
CEACAM1-211ENST00000485605 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
CEACAM1-211ENST00000485605 POTEHQ6S545 545 aa12.42□□□□□ -0.42
CEACAM1-211ENST00000485605 NUBP1P53384 320 aa12.38□□□□□ -0.43
CEACAM1-211ENST00000485605 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
CEACAM1-211ENST00000485605 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
CEACAM1-211ENST00000485605 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
CEACAM1-211ENST00000485605 SPOCK2Q92563 424 aa12.3□□□□□ -0.44
CEACAM1-211ENST00000485605 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
CEACAM1-211ENST00000485605 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
CEACAM1-211ENST00000485605 EVX2Q03828 476 aa12.27□□□□□ -0.45
CEACAM1-211ENST00000485605 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
CEACAM1-211ENST00000485605 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
CEACAM1-211ENST00000485605 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
CEACAM1-211ENST00000485605 PKD2Q13563 968 aa12.16□□□□□ -0.46
CEACAM1-211ENST00000485605 HAX1O00165 279 aa12.14□□□□□ -0.47
CEACAM1-211ENST00000485605 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
CEACAM1-211ENST00000485605 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
CEACAM1-211ENST00000485605 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms