RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
SFPQ-209ENST00000485454 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
SFPQ-209ENST00000485454 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
SFPQ-209ENST00000485454 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
SFPQ-209ENST00000485454 FOXD1Q16676 465 aa16.61■□□□□ 0.25
SFPQ-209ENST00000485454 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
SFPQ-209ENST00000485454 MSH5O43196 834 aa15.57■□□□□ 0.08
SFPQ-209ENST00000485454 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
SFPQ-209ENST00000485454 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
SFPQ-209ENST00000485454 ADRA2BP18089 450 aa15.51■□□□□ 0.07
SFPQ-209ENST00000485454 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
SFPQ-209ENST00000485454 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
SFPQ-209ENST00000485454 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
SFPQ-209ENST00000485454 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
SFPQ-209ENST00000485454 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
SFPQ-209ENST00000485454 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
SFPQ-209ENST00000485454 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
SFPQ-209ENST00000485454 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
SFPQ-209ENST00000485454 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
SFPQ-209ENST00000485454 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
SFPQ-209ENST00000485454 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
SFPQ-209ENST00000485454 KCNA4P22459 653 aa13.32□□□□□ -0.28
SFPQ-209ENST00000485454 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
SFPQ-209ENST00000485454 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
SFPQ-209ENST00000485454 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
SFPQ-209ENST00000485454 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
SFPQ-209ENST00000485454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.328e-12■□□□□ 10.4
SFPQ-209ENST00000485454 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
SFPQ-209ENST00000485454 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
SFPQ-209ENST00000485454 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
SFPQ-209ENST00000485454 CAPN15O75808 1086 aa12.55□□□□□ -0.4
SFPQ-209ENST00000485454 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
SFPQ-209ENST00000485454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
SFPQ-209ENST00000485454 DSG3P32926 999 aa12.43□□□□□ -0.42
SFPQ-209ENST00000485454 APLP2Q06481 763 aa12.43□□□□□ -0.42
SFPQ-209ENST00000485454 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
SFPQ-209ENST00000485454 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
SFPQ-209ENST00000485454 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
SFPQ-209ENST00000485454 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
SFPQ-209ENST00000485454 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
SFPQ-209ENST00000485454 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.45
SFPQ-209ENST00000485454 ABCB7O75027 752 aa12.25□□□□□ -0.45
SFPQ-209ENST00000485454 ZBTB22O15209 634 aa12.23□□□□□ -0.45
SFPQ-209ENST00000485454 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
SFPQ-209ENST00000485454 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
SFPQ-209ENST00000485454 POLA2Q14181 598 aa12.02□□□□□ -0.49
SFPQ-209ENST00000485454 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
SFPQ-209ENST00000485454 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
SFPQ-209ENST00000485454 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
SFPQ-209ENST00000485454 POTEHQ6S545 545 aa11.86□□□□□ -0.51
SFPQ-209ENST00000485454 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
SFPQ-209ENST00000485454 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
SFPQ-209ENST00000485454 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
SFPQ-209ENST00000485454 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
SFPQ-209ENST00000485454 FBLN2P98095 1184 aa11.53□□□□□ -0.56
SFPQ-209ENST00000485454 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
SFPQ-209ENST00000485454 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
SFPQ-209ENST00000485454 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
SFPQ-209ENST00000485454 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
SFPQ-209ENST00000485454 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
SFPQ-209ENST00000485454 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
SFPQ-209ENST00000485454 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
SFPQ-209ENST00000485454 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
SFPQ-209ENST00000485454 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
SFPQ-209ENST00000485454 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
SFPQ-209ENST00000485454 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
SFPQ-209ENST00000485454 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
SFPQ-209ENST00000485454 HAX1O00165 279 aa11.13□□□□□ -0.63
SFPQ-209ENST00000485454 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
SFPQ-209ENST00000485454 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
SFPQ-209ENST00000485454 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
SFPQ-209ENST00000485454 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
SFPQ-209ENST00000485454 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
SFPQ-209ENST00000485454 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
SFPQ-209ENST00000485454 EVX2Q03828 476 aa10.95□□□□□ -0.66
SFPQ-209ENST00000485454 FKBP8Q14318 412 aa10.91□□□□□ -0.66
SFPQ-209ENST00000485454 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
SFPQ-209ENST00000485454 STAG3Q9UJ98 1225 aa10.85□□□□□ -0.67
SFPQ-209ENST00000485454 PROM2Q8N271 834 aa10.84□□□□□ -0.67
SFPQ-209ENST00000485454 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
SFPQ-209ENST00000485454 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
SFPQ-209ENST00000485454 GABBR2O75899 941 aa10.73□□□□□ -0.69
SFPQ-209ENST00000485454 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
SFPQ-209ENST00000485454 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
SFPQ-209ENST00000485454 CLCN6P51797 869 aa10.6□□□□□ -0.71
SFPQ-209ENST00000485454 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
SFPQ-209ENST00000485454 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
SFPQ-209ENST00000485454 ZNF579Q8NAF0 562 aaKnown RBP10.57□□□□□ -0.72
SFPQ-209ENST00000485454 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
SFPQ-209ENST00000485454 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
SFPQ-209ENST00000485454 MIER1Q8N108 512 aa10.5□□□□□ -0.73
SFPQ-209ENST00000485454 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
SFPQ-209ENST00000485454 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
SFPQ-209ENST00000485454 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
SFPQ-209ENST00000485454 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
SFPQ-209ENST00000485454 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
SFPQ-209ENST00000485454 LHX8Q68G74 356 aa10.44□□□□□ -0.74
SFPQ-209ENST00000485454 PHF12Q96QT6 1004 aa10.44□□□□□ -0.74
SFPQ-209ENST00000485454 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
SFPQ-209ENST00000485454 TSPYL2Q9H2G4 693 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms