RNA–Protein interactions for RNA: ENST00000485092.5

SDHB-206, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-206ENST00000485092 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
SDHB-206ENST00000485092 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
SDHB-206ENST00000485092 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
SDHB-206ENST00000485092 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
SDHB-206ENST00000485092 FOXD1Q16676 465 aa21.99■■□□□ 1.11
SDHB-206ENST00000485092 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.09
SDHB-206ENST00000485092 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
SDHB-206ENST00000485092 ADRA2BP18089 450 aa20.94■□□□□ 0.94
SDHB-206ENST00000485092 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
SDHB-206ENST00000485092 MSH5O43196 834 aa20.43■□□□□ 0.86
SDHB-206ENST00000485092 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
SDHB-206ENST00000485092 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
SDHB-206ENST00000485092 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
SDHB-206ENST00000485092 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
SDHB-206ENST00000485092 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
SDHB-206ENST00000485092 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
SDHB-206ENST00000485092 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
SDHB-206ENST00000485092 KCNA4P22459 653 aa18.45■□□□□ 0.54
SDHB-206ENST00000485092 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
SDHB-206ENST00000485092 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
SDHB-206ENST00000485092 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
SDHB-206ENST00000485092 DCAF8L1A6NGE4 600 aa18.1■□□□□ 0.49
SDHB-206ENST00000485092 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
SDHB-206ENST00000485092 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
SDHB-206ENST00000485092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.48e-6■□□□□ 8
SDHB-206ENST00000485092 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
SDHB-206ENST00000485092 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
SDHB-206ENST00000485092 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
SDHB-206ENST00000485092 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
SDHB-206ENST00000485092 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
SDHB-206ENST00000485092 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
SDHB-206ENST00000485092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
SDHB-206ENST00000485092 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
SDHB-206ENST00000485092 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
SDHB-206ENST00000485092 ZBTB22O15209 634 aa16.95■□□□□ 0.3
SDHB-206ENST00000485092 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
SDHB-206ENST00000485092 APLP2Q06481 763 aa16.87■□□□□ 0.29
SDHB-206ENST00000485092 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
SDHB-206ENST00000485092 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
SDHB-206ENST00000485092 CAPN15O75808 1086 aa16.77■□□□□ 0.28
SDHB-206ENST00000485092 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
SDHB-206ENST00000485092 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
SDHB-206ENST00000485092 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
SDHB-206ENST00000485092 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
SDHB-206ENST00000485092 DSG3P32926 999 aa16.51■□□□□ 0.23
SDHB-206ENST00000485092 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
SDHB-206ENST00000485092 ABCB7O75027 752 aa16.41■□□□□ 0.22
SDHB-206ENST00000485092 POLA2Q14181 598 aa16.29■□□□□ 0.2
SDHB-206ENST00000485092 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
SDHB-206ENST00000485092 FBLN2P98095 1184 aa15.89■□□□□ 0.13
SDHB-206ENST00000485092 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SDHB-206ENST00000485092 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
SDHB-206ENST00000485092 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
SDHB-206ENST00000485092 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
SDHB-206ENST00000485092 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
SDHB-206ENST00000485092 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
SDHB-206ENST00000485092 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
SDHB-206ENST00000485092 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
SDHB-206ENST00000485092 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
SDHB-206ENST00000485092 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
SDHB-206ENST00000485092 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
SDHB-206ENST00000485092 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDHB-206ENST00000485092 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
SDHB-206ENST00000485092 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
SDHB-206ENST00000485092 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
SDHB-206ENST00000485092 FKBP8Q14318 412 aa15.12■□□□□ 0.01
SDHB-206ENST00000485092 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
SDHB-206ENST00000485092 PROM2Q8N271 834 aa15.02■□□□□ -0
SDHB-206ENST00000485092 POTEHQ6S545 545 aa15□□□□□ -0.01
SDHB-206ENST00000485092 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
SDHB-206ENST00000485092 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
SDHB-206ENST00000485092 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
SDHB-206ENST00000485092 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SDHB-206ENST00000485092 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
SDHB-206ENST00000485092 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
SDHB-206ENST00000485092 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
SDHB-206ENST00000485092 CREBZFQ9NS37 354 aa14.67□□□□□ -0.06
SDHB-206ENST00000485092 FARP1Q9Y4F1 1045 aaPredicted RBP14.6□□□□□ -0.07
SDHB-206ENST00000485092 MIER1Q8N108 512 aa14.58□□□□□ -0.08
SDHB-206ENST00000485092 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
SDHB-206ENST00000485092 HAX1O00165 279 aa14.56□□□□□ -0.08
SDHB-206ENST00000485092 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
SDHB-206ENST00000485092 MNX1P50219 401 aaPredicted RBP14.48□□□□□ -0.09
SDHB-206ENST00000485092 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
SDHB-206ENST00000485092 VASPP50552 380 aaPredicted RBP14.46□□□□□ -0.09
SDHB-206ENST00000485092 C19orf67A6NJJ6 358 aa14.45□□□□□ -0.1
SDHB-206ENST00000485092 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
SDHB-206ENST00000485092 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
SDHB-206ENST00000485092 EVX2Q03828 476 aa14.35□□□□□ -0.11
SDHB-206ENST00000485092 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
SDHB-206ENST00000485092 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
SDHB-206ENST00000485092 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
SDHB-206ENST00000485092 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
SDHB-206ENST00000485092 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
SDHB-206ENST00000485092 NUBP1P53384 320 aa14.2□□□□□ -0.14
SDHB-206ENST00000485092 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
SDHB-206ENST00000485092 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
SDHB-206ENST00000485092 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
SDHB-206ENST00000485092 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
SDHB-206ENST00000485092 CLCN6P51797 869 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms