RNA–Protein interactions for RNA: ENST00000484109.1

ABCC4-205, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2

Gene ABCC4, Length 532 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-205ENST00000484109 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
ABCC4-205ENST00000484109 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
ABCC4-205ENST00000484109 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
ABCC4-205ENST00000484109 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
ABCC4-205ENST00000484109 FOXD1Q16676 465 aa24.21■■□□□ 1.47
ABCC4-205ENST00000484109 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.45
ABCC4-205ENST00000484109 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
ABCC4-205ENST00000484109 ADRA2BP18089 450 aa23.19■■□□□ 1.3
ABCC4-205ENST00000484109 PIAS4Q8N2W9 510 aaPredicted RBP22.8■■□□□ 1.24
ABCC4-205ENST00000484109 MSH5O43196 834 aa22.36■■□□□ 1.17
ABCC4-205ENST00000484109 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
ABCC4-205ENST00000484109 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
ABCC4-205ENST00000484109 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
ABCC4-205ENST00000484109 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
ABCC4-205ENST00000484109 CNKSR2Q8WXI2 1034 aa20.7■□□□□ 0.9
ABCC4-205ENST00000484109 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
ABCC4-205ENST00000484109 POTEDQ86YR6 584 aa20.65■□□□□ 0.9
ABCC4-205ENST00000484109 KCNA4P22459 653 aa20.61■□□□□ 0.89
ABCC4-205ENST00000484109 NPM3O75607 178 aaKnown RBP20.35■□□□□ 0.85
ABCC4-205ENST00000484109 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
ABCC4-205ENST00000484109 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
ABCC4-205ENST00000484109 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
ABCC4-205ENST00000484109 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
ABCC4-205ENST00000484109 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
ABCC4-205ENST00000484109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
ABCC4-205ENST00000484109 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
ABCC4-205ENST00000484109 RNF39Q9H2S5 420 aa19.15■□□□□ 0.66
ABCC4-205ENST00000484109 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
ABCC4-205ENST00000484109 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
ABCC4-205ENST00000484109 ZBTB22O15209 634 aa18.95■□□□□ 0.62
ABCC4-205ENST00000484109 C1QBPQ07021 282 aaKnown RBP18.92■□□□□ 0.62
ABCC4-205ENST00000484109 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
ABCC4-205ENST00000484109 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
ABCC4-205ENST00000484109 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
ABCC4-205ENST00000484109 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
ABCC4-205ENST00000484109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
ABCC4-205ENST00000484109 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
ABCC4-205ENST00000484109 SAMD1Q6SPF0 538 aaPredicted RBP18.64■□□□□ 0.57
ABCC4-205ENST00000484109 APLP2Q06481 763 aa18.55■□□□□ 0.56
ABCC4-205ENST00000484109 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
ABCC4-205ENST00000484109 CAPN15O75808 1086 aa18.5■□□□□ 0.55
ABCC4-205ENST00000484109 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
ABCC4-205ENST00000484109 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
ABCC4-205ENST00000484109 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
ABCC4-205ENST00000484109 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
ABCC4-205ENST00000484109 DSG3P32926 999 aa18.18■□□□□ 0.5
ABCC4-205ENST00000484109 ABCB7O75027 752 aa18.13■□□□□ 0.49
ABCC4-205ENST00000484109 POLA2Q14181 598 aa18.04■□□□□ 0.48
ABCC4-205ENST00000484109 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
ABCC4-205ENST00000484109 FBLN2P98095 1184 aa17.59■□□□□ 0.41
ABCC4-205ENST00000484109 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
ABCC4-205ENST00000484109 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
ABCC4-205ENST00000484109 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
ABCC4-205ENST00000484109 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
ABCC4-205ENST00000484109 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
ABCC4-205ENST00000484109 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
ABCC4-205ENST00000484109 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
ABCC4-205ENST00000484109 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
ABCC4-205ENST00000484109 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
ABCC4-205ENST00000484109 SSUH2Q9Y2M2 353 aa17.03■□□□□ 0.32
ABCC4-205ENST00000484109 FKBP8Q14318 412 aa16.96■□□□□ 0.31
ABCC4-205ENST00000484109 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
ABCC4-205ENST00000484109 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCC4-205ENST00000484109 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
ABCC4-205ENST00000484109 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
ABCC4-205ENST00000484109 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
ABCC4-205ENST00000484109 PROM2Q8N271 834 aa16.7■□□□□ 0.26
ABCC4-205ENST00000484109 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
ABCC4-205ENST00000484109 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
ABCC4-205ENST00000484109 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
ABCC4-205ENST00000484109 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
ABCC4-205ENST00000484109 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
ABCC4-205ENST00000484109 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
ABCC4-205ENST00000484109 PRKAR2AP13861 404 aaKnown RBP16.33■□□□□ 0.2
ABCC4-205ENST00000484109 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
ABCC4-205ENST00000484109 POTEHQ6S545 545 aa16.32■□□□□ 0.2
ABCC4-205ENST00000484109 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
ABCC4-205ENST00000484109 MIER1Q8N108 512 aa16.25■□□□□ 0.19
ABCC4-205ENST00000484109 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
ABCC4-205ENST00000484109 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
ABCC4-205ENST00000484109 VASPP50552 380 aaPredicted RBP16.16■□□□□ 0.18
ABCC4-205ENST00000484109 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
ABCC4-205ENST00000484109 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
ABCC4-205ENST00000484109 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
ABCC4-205ENST00000484109 HAX1O00165 279 aa15.99■□□□□ 0.15
ABCC4-205ENST00000484109 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
ABCC4-205ENST00000484109 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
ABCC4-205ENST00000484109 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
ABCC4-205ENST00000484109 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
ABCC4-205ENST00000484109 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
ABCC4-205ENST00000484109 EVX2Q03828 476 aa15.83■□□□□ 0.12
ABCC4-205ENST00000484109 NUBP1P53384 320 aa15.79■□□□□ 0.12
ABCC4-205ENST00000484109 SPOCK2Q92563 424 aa15.78■□□□□ 0.12
ABCC4-205ENST00000484109 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
ABCC4-205ENST00000484109 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
ABCC4-205ENST00000484109 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.12
ABCC4-205ENST00000484109 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
ABCC4-205ENST00000484109 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
ABCC4-205ENST00000484109 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
ABCC4-205ENST00000484109 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms