RNA–Protein interactions for RNA: ENST00000483866.1

KDM3A-211, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 449 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-211ENST00000483866 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
KDM3A-211ENST00000483866 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
KDM3A-211ENST00000483866 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
KDM3A-211ENST00000483866 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-211ENST00000483866 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
KDM3A-211ENST00000483866 FOXD1Q16676 465 aa12.13□□□□□ -0.47
KDM3A-211ENST00000483866 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
KDM3A-211ENST00000483866 MSH5O43196 834 aa11.4□□□□□ -0.58
KDM3A-211ENST00000483866 ADRA2BP18089 450 aa11.33□□□□□ -0.6
KDM3A-211ENST00000483866 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
KDM3A-211ENST00000483866 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
KDM3A-211ENST00000483866 KCNA4P22459 653 aa11.03□□□□□ -0.64
KDM3A-211ENST00000483866 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
KDM3A-211ENST00000483866 PPP4R3CPQ6ZMV5 832 aa10.74□□□□□ -0.69
KDM3A-211ENST00000483866 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
KDM3A-211ENST00000483866 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
KDM3A-211ENST00000483866 CSRNP3Q8WYN3 585 aa10.48□□□□□ -0.73
KDM3A-211ENST00000483866 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
KDM3A-211ENST00000483866 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
KDM3A-211ENST00000483866 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
KDM3A-211ENST00000483866 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
KDM3A-211ENST00000483866 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
KDM3A-211ENST00000483866 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
KDM3A-211ENST00000483866 ZBTB22O15209 634 aa10.14□□□□□ -0.79
KDM3A-211ENST00000483866 NISCHQ9Y2I1 1504 aa10.04□□□□□ -0.8
KDM3A-211ENST00000483866 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
KDM3A-211ENST00000483866 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
KDM3A-211ENST00000483866 DNAJC5BQ9UF47 199 aa9.96□□□□□ -0.82
KDM3A-211ENST00000483866 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
KDM3A-211ENST00000483866 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
KDM3A-211ENST00000483866 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
KDM3A-211ENST00000483866 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
KDM3A-211ENST00000483866 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-211ENST00000483866 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
KDM3A-211ENST00000483866 C1QBPQ07021 282 aaKnown RBP9.54□□□□□ -0.88
KDM3A-211ENST00000483866 POTEHQ6S545 545 aa9.53□□□□□ -0.88
KDM3A-211ENST00000483866 FKBP8Q14318 412 aa9.49□□□□□ -0.89
KDM3A-211ENST00000483866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.49□□□□□ -0.891e-7■■□□□ 13.4
KDM3A-211ENST00000483866 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
KDM3A-211ENST00000483866 RTN4Q9NQC3 1192 aaKnown RBP9.46□□□□□ -0.9
KDM3A-211ENST00000483866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.34□□□□□ -0.91
KDM3A-211ENST00000483866 HNRNPUL2Q1KMD3 747 aaKnown RBP9.34□□□□□ -0.91
KDM3A-211ENST00000483866 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
KDM3A-211ENST00000483866 ATF5Q9Y2D1 282 aaPredicted RBP9.33□□□□□ -0.92
KDM3A-211ENST00000483866 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
KDM3A-211ENST00000483866 U3KPZ7 1027 aaPredicted RBP9.27□□□□□ -0.93
KDM3A-211ENST00000483866 CAPN15O75808 1086 aa9.14□□□□□ -0.95
KDM3A-211ENST00000483866 APLP2Q06481 763 aa9.13□□□□□ -0.95
KDM3A-211ENST00000483866 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
KDM3A-211ENST00000483866 SPINK5Q9NQ38 1064 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-211ENST00000483866 DSG3P32926 999 aa9.04□□□□□ -0.96
KDM3A-211ENST00000483866 SPDYE4A6NLX3 237 aa9.01□□□□□ -0.97
KDM3A-211ENST00000483866 TRHP20396 242 aaPredicted RBP9□□□□□ -0.97
KDM3A-211ENST00000483866 FBXO3Q9UK99 471 aa9□□□□□ -0.97
KDM3A-211ENST00000483866 FBLN2P98095 1184 aa8.95□□□□□ -0.98
KDM3A-211ENST00000483866 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
KDM3A-211ENST00000483866 ABCB7O75027 752 aa8.91□□□□□ -0.98
KDM3A-211ENST00000483866 CCDC180Q9P1Z9 1646 aa8.87□□□□□ -0.99
KDM3A-211ENST00000483866 POLA2Q14181 598 aa8.87□□□□□ -0.99
KDM3A-211ENST00000483866 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
KDM3A-211ENST00000483866 PROM2Q8N271 834 aa8.85□□□□□ -0.99
KDM3A-211ENST00000483866 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
KDM3A-211ENST00000483866 IFNLR1Q8IU57 520 aaPredicted RBP8.76□□□□□ -1.01
KDM3A-211ENST00000483866 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
KDM3A-211ENST00000483866 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
KDM3A-211ENST00000483866 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
KDM3A-211ENST00000483866 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
KDM3A-211ENST00000483866 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
KDM3A-211ENST00000483866 PKD2Q13563 968 aa8.64□□□□□ -1.03
KDM3A-211ENST00000483866 SP7Q8TDD2 431 aaPredicted RBP8.62□□□□□ -1.03
KDM3A-211ENST00000483866 ZNF692Q9BU19 519 aaPredicted RBP8.62□□□□□ -1.03
KDM3A-211ENST00000483866 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
KDM3A-211ENST00000483866 CHRDL2Q6WN34 429 aa8.59□□□□□ -1.03
KDM3A-211ENST00000483866 OSCARQ8IYS5 282 aa8.57□□□□□ -1.04
KDM3A-211ENST00000483866 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
KDM3A-211ENST00000483866 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
KDM3A-211ENST00000483866 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
KDM3A-211ENST00000483866 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
KDM3A-211ENST00000483866 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
KDM3A-211ENST00000483866 SPDYE2Q495Y8 402 aa8.55□□□□□ -1.04
KDM3A-211ENST00000483866 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
KDM3A-211ENST00000483866 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
KDM3A-211ENST00000483866 MIER1Q8N108 512 aa8.51□□□□□ -1.05
KDM3A-211ENST00000483866 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
KDM3A-211ENST00000483866 BBXQ8WY36 941 aaPredicted RBP8.48□□□□□ -1.05
KDM3A-211ENST00000483866 VSIG10Q8N0Z9 540 aa8.47□□□□□ -1.05
KDM3A-211ENST00000483866 AKT1S1Q96B36 256 aa8.46□□□□□ -1.06
KDM3A-211ENST00000483866 BCANQ96GW7 911 aa8.46□□□□□ -1.06
KDM3A-211ENST00000483866 PLEKHG5O94827 1062 aa8.45□□□□□ -1.06
KDM3A-211ENST00000483866 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
KDM3A-211ENST00000483866 CFAP44Q96MT7 982 aa8.45□□□□□ -1.06
KDM3A-211ENST00000483866 RGL2O15211 777 aa8.44□□□□□ -1.06
KDM3A-211ENST00000483866 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
KDM3A-211ENST00000483866 CIZ1Q9ULV3 898 aaPredicted RBP8.43□□□□□ -1.06
KDM3A-211ENST00000483866 ZBTB47Q9UFB7 747 aaPredicted RBP8.41□□□□□ -1.06
KDM3A-211ENST00000483866 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
KDM3A-211ENST00000483866 DCAF1Q9Y4B6 1507 aa8.38□□□□□ -1.07
KDM3A-211ENST00000483866 ABCC9O60706 1549 aa8.36□□□□□ -1.07
KDM3A-211ENST00000483866 REM2Q8IYK8 340 aaPredicted RBP8.36□□□□□ -1.07
KDM3A-211ENST00000483866 MYO15BQ96JP2 1530 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms