RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
MSL3-216ENST00000483645 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
MSL3-216ENST00000483645 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
MSL3-216ENST00000483645 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
MSL3-216ENST00000483645 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
MSL3-216ENST00000483645 FOXD1Q16676 465 aa18.93■□□□□ 0.62
MSL3-216ENST00000483645 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
MSL3-216ENST00000483645 ADRA2BP18089 450 aa18.08■□□□□ 0.48
MSL3-216ENST00000483645 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
MSL3-216ENST00000483645 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
MSL3-216ENST00000483645 MSH5O43196 834 aa17.63■□□□□ 0.41
MSL3-216ENST00000483645 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
MSL3-216ENST00000483645 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
MSL3-216ENST00000483645 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
MSL3-216ENST00000483645 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
MSL3-216ENST00000483645 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
MSL3-216ENST00000483645 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
MSL3-216ENST00000483645 KCNA4P22459 653 aa16.04■□□□□ 0.16
MSL3-216ENST00000483645 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
MSL3-216ENST00000483645 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
MSL3-216ENST00000483645 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
MSL3-216ENST00000483645 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
MSL3-216ENST00000483645 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
MSL3-216ENST00000483645 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
MSL3-216ENST00000483645 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
MSL3-216ENST00000483645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
MSL3-216ENST00000483645 RNF39Q9H2S5 420 aa15.02■□□□□ -0
MSL3-216ENST00000483645 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
MSL3-216ENST00000483645 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
MSL3-216ENST00000483645 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
MSL3-216ENST00000483645 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
MSL3-216ENST00000483645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
MSL3-216ENST00000483645 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
MSL3-216ENST00000483645 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
MSL3-216ENST00000483645 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
MSL3-216ENST00000483645 ZBTB22O15209 634 aa14.7□□□□□ -0.06
MSL3-216ENST00000483645 APLP2Q06481 763 aa14.68□□□□□ -0.06
MSL3-216ENST00000483645 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
MSL3-216ENST00000483645 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
MSL3-216ENST00000483645 CAPN15O75808 1086 aa14.52□□□□□ -0.09
MSL3-216ENST00000483645 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
MSL3-216ENST00000483645 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
MSL3-216ENST00000483645 POTEHQ6S545 545 aa14.42□□□□□ -0.1
MSL3-216ENST00000483645 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
MSL3-216ENST00000483645 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
MSL3-216ENST00000483645 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
MSL3-216ENST00000483645 DSG3P32926 999 aa14.24□□□□□ -0.13
MSL3-216ENST00000483645 ABCB7O75027 752 aa14.18□□□□□ -0.14
MSL3-216ENST00000483645 POLA2Q14181 598 aa14.11□□□□□ -0.15
MSL3-216ENST00000483645 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
MSL3-216ENST00000483645 FBLN2P98095 1184 aa13.84□□□□□ -0.19
MSL3-216ENST00000483645 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
MSL3-216ENST00000483645 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
MSL3-216ENST00000483645 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
MSL3-216ENST00000483645 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
MSL3-216ENST00000483645 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
MSL3-216ENST00000483645 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
MSL3-216ENST00000483645 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
MSL3-216ENST00000483645 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
MSL3-216ENST00000483645 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
MSL3-216ENST00000483645 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
MSL3-216ENST00000483645 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
MSL3-216ENST00000483645 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
MSL3-216ENST00000483645 FKBP8Q14318 412 aa13.22□□□□□ -0.29
MSL3-216ENST00000483645 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
MSL3-216ENST00000483645 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
MSL3-216ENST00000483645 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
MSL3-216ENST00000483645 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
MSL3-216ENST00000483645 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
MSL3-216ENST00000483645 PROM2Q8N271 834 aa13.03□□□□□ -0.32
MSL3-216ENST00000483645 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
MSL3-216ENST00000483645 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
MSL3-216ENST00000483645 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
MSL3-216ENST00000483645 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
MSL3-216ENST00000483645 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
MSL3-216ENST00000483645 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
MSL3-216ENST00000483645 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
MSL3-216ENST00000483645 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
MSL3-216ENST00000483645 MIER1Q8N108 512 aa12.72□□□□□ -0.37
MSL3-216ENST00000483645 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
MSL3-216ENST00000483645 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
MSL3-216ENST00000483645 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
MSL3-216ENST00000483645 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
MSL3-216ENST00000483645 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
MSL3-216ENST00000483645 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
MSL3-216ENST00000483645 HAX1O00165 279 aa12.57□□□□□ -0.4
MSL3-216ENST00000483645 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
MSL3-216ENST00000483645 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
MSL3-216ENST00000483645 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
MSL3-216ENST00000483645 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
MSL3-216ENST00000483645 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
MSL3-216ENST00000483645 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
MSL3-216ENST00000483645 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
MSL3-216ENST00000483645 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
MSL3-216ENST00000483645 SPOCK2Q92563 424 aa12.35□□□□□ -0.43
MSL3-216ENST00000483645 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
MSL3-216ENST00000483645 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
MSL3-216ENST00000483645 NUBP1P53384 320 aa12.31□□□□□ -0.44
MSL3-216ENST00000483645 EVX2Q03828 476 aa12.31□□□□□ -0.44
MSL3-216ENST00000483645 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms