RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
PDCD4-207ENST00000483595 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
PDCD4-207ENST00000483595 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
PDCD4-207ENST00000483595 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
PDCD4-207ENST00000483595 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
PDCD4-207ENST00000483595 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PDCD4-207ENST00000483595 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
PDCD4-207ENST00000483595 ADRA2BP18089 450 aa15.89■□□□□ 0.13
PDCD4-207ENST00000483595 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
PDCD4-207ENST00000483595 MSH5O43196 834 aa15.21■□□□□ 0.03
PDCD4-207ENST00000483595 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
PDCD4-207ENST00000483595 KCNA4P22459 653 aa14.42□□□□□ -0.1
PDCD4-207ENST00000483595 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
PDCD4-207ENST00000483595 NISCHQ9Y2I1 1504 aa14.39□□□□□ -0.11
PDCD4-207ENST00000483595 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
PDCD4-207ENST00000483595 POTEDQ86YR6 584 aa14.28□□□□□ -0.12
PDCD4-207ENST00000483595 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
PDCD4-207ENST00000483595 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
PDCD4-207ENST00000483595 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
PDCD4-207ENST00000483595 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
PDCD4-207ENST00000483595 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
PDCD4-207ENST00000483595 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
PDCD4-207ENST00000483595 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
PDCD4-207ENST00000483595 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
PDCD4-207ENST00000483595 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
PDCD4-207ENST00000483595 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
PDCD4-207ENST00000483595 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
PDCD4-207ENST00000483595 ZBTB22O15209 634 aa13.33□□□□□ -0.28
PDCD4-207ENST00000483595 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
PDCD4-207ENST00000483595 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
PDCD4-207ENST00000483595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDCD4-207ENST00000483595 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
PDCD4-207ENST00000483595 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
PDCD4-207ENST00000483595 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
PDCD4-207ENST00000483595 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
PDCD4-207ENST00000483595 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-207ENST00000483595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
PDCD4-207ENST00000483595 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
PDCD4-207ENST00000483595 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
PDCD4-207ENST00000483595 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
PDCD4-207ENST00000483595 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
PDCD4-207ENST00000483595 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
PDCD4-207ENST00000483595 APLP2Q06481 763 aa12.58□□□□□ -0.4
PDCD4-207ENST00000483595 CAPN15O75808 1086 aa12.55□□□□□ -0.4
PDCD4-207ENST00000483595 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
PDCD4-207ENST00000483595 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
PDCD4-207ENST00000483595 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
PDCD4-207ENST00000483595 DSG3P32926 999 aa12.4□□□□□ -0.42
PDCD4-207ENST00000483595 ABCB7O75027 752 aa12.38□□□□□ -0.43
PDCD4-207ENST00000483595 POLA2Q14181 598 aa12.33□□□□□ -0.44
PDCD4-207ENST00000483595 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-207ENST00000483595 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
PDCD4-207ENST00000483595 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-207ENST00000483595 FBLN2P98095 1184 aa12.04□□□□□ -0.48
PDCD4-207ENST00000483595 DCAF1Q9Y4B6 1507 aa12.02□□□□□ -0.48
PDCD4-207ENST00000483595 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
PDCD4-207ENST00000483595 FKBP8Q14318 412 aa11.92□□□□□ -0.5
PDCD4-207ENST00000483595 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
PDCD4-207ENST00000483595 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
PDCD4-207ENST00000483595 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
PDCD4-207ENST00000483595 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
PDCD4-207ENST00000483595 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
PDCD4-207ENST00000483595 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
PDCD4-207ENST00000483595 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
PDCD4-207ENST00000483595 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
PDCD4-207ENST00000483595 PROM2Q8N271 834 aa11.71□□□□□ -0.53
PDCD4-207ENST00000483595 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
PDCD4-207ENST00000483595 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
PDCD4-207ENST00000483595 NACADO15069 1562 aa11.65□□□□□ -0.54
PDCD4-207ENST00000483595 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDCD4-207ENST00000483595 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
PDCD4-207ENST00000483595 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-207ENST00000483595 ABCC9O60706 1549 aa11.51□□□□□ -0.57
PDCD4-207ENST00000483595 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
PDCD4-207ENST00000483595 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
PDCD4-207ENST00000483595 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
PDCD4-207ENST00000483595 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
PDCD4-207ENST00000483595 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
PDCD4-207ENST00000483595 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
PDCD4-207ENST00000483595 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
PDCD4-207ENST00000483595 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
PDCD4-207ENST00000483595 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
PDCD4-207ENST00000483595 VASPP50552 380 aaPredicted RBP11.33□□□□□ -0.6
PDCD4-207ENST00000483595 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
PDCD4-207ENST00000483595 POTEHQ6S545 545 aa11.24□□□□□ -0.61
PDCD4-207ENST00000483595 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
PDCD4-207ENST00000483595 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
PDCD4-207ENST00000483595 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDCD4-207ENST00000483595 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
PDCD4-207ENST00000483595 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
PDCD4-207ENST00000483595 MIER1Q8N108 512 aa11.17□□□□□ -0.62
PDCD4-207ENST00000483595 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
PDCD4-207ENST00000483595 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
PDCD4-207ENST00000483595 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
PDCD4-207ENST00000483595 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-207ENST00000483595 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
PDCD4-207ENST00000483595 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
PDCD4-207ENST00000483595 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
PDCD4-207ENST00000483595 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
PDCD4-207ENST00000483595 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms