RNA–Protein interactions for RNA: ENST00000483245.1

LINC02000-201, Transcript of long intergenic non-protein coding RNA 2000, humanhuman

TSL 2 BASIC

Gene LINC02000, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02000-201ENST00000483245 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
LINC02000-201ENST00000483245 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
LINC02000-201ENST00000483245 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
LINC02000-201ENST00000483245 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
LINC02000-201ENST00000483245 FOXD1Q16676 465 aa25.14■■□□□ 1.62
LINC02000-201ENST00000483245 PLPPR3Q6T4P5 718 aa24.2■■□□□ 1.46
LINC02000-201ENST00000483245 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
LINC02000-201ENST00000483245 MSH5O43196 834 aa23.51■■□□□ 1.35
LINC02000-201ENST00000483245 ADRA2BP18089 450 aa23.51■■□□□ 1.35
LINC02000-201ENST00000483245 PIAS4Q8N2W9 510 aaPredicted RBP23.51■■□□□ 1.35
LINC02000-201ENST00000483245 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
LINC02000-201ENST00000483245 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
LINC02000-201ENST00000483245 MAPK8IP2Q13387 824 aaPredicted RBP21.54■■□□□ 1.04
LINC02000-201ENST00000483245 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
LINC02000-201ENST00000483245 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
LINC02000-201ENST00000483245 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
LINC02000-201ENST00000483245 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
LINC02000-201ENST00000483245 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
LINC02000-201ENST00000483245 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
LINC02000-201ENST00000483245 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
LINC02000-201ENST00000483245 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
LINC02000-201ENST00000483245 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
LINC02000-201ENST00000483245 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
LINC02000-201ENST00000483245 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
LINC02000-201ENST00000483245 KCNA4P22459 653 aa19.86■□□□□ 0.77
LINC02000-201ENST00000483245 C1QBPQ07021 282 aaKnown RBP19.8■□□□□ 0.76
LINC02000-201ENST00000483245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.69■□□□□ 0.74
LINC02000-201ENST00000483245 U3KPZ7 1027 aaPredicted RBP19.32■□□□□ 0.68
LINC02000-201ENST00000483245 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
LINC02000-201ENST00000483245 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
LINC02000-201ENST00000483245 CAPN15O75808 1086 aa18.91■□□□□ 0.62
LINC02000-201ENST00000483245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
LINC02000-201ENST00000483245 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
LINC02000-201ENST00000483245 DSG3P32926 999 aa18.82■□□□□ 0.6
LINC02000-201ENST00000483245 APLP2Q06481 763 aa18.81■□□□□ 0.6
LINC02000-201ENST00000483245 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
LINC02000-201ENST00000483245 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
LINC02000-201ENST00000483245 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
LINC02000-201ENST00000483245 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
LINC02000-201ENST00000483245 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
LINC02000-201ENST00000483245 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
LINC02000-201ENST00000483245 ABCB7O75027 752 aa18.48■□□□□ 0.55
LINC02000-201ENST00000483245 ZBTB22O15209 634 aa18.28■□□□□ 0.52
LINC02000-201ENST00000483245 POLA2Q14181 598 aa18.19■□□□□ 0.5
LINC02000-201ENST00000483245 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
LINC02000-201ENST00000483245 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
LINC02000-201ENST00000483245 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
LINC02000-201ENST00000483245 POTEHQ6S545 545 aa17.99■□□□□ 0.47
LINC02000-201ENST00000483245 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
LINC02000-201ENST00000483245 ATXN8OSP0DMR3 200 aa17.97■□□□□ 0.47
LINC02000-201ENST00000483245 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
LINC02000-201ENST00000483245 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
LINC02000-201ENST00000483245 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
LINC02000-201ENST00000483245 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
LINC02000-201ENST00000483245 FBLN2P98095 1184 aa17.46■□□□□ 0.39
LINC02000-201ENST00000483245 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
LINC02000-201ENST00000483245 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
LINC02000-201ENST00000483245 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
LINC02000-201ENST00000483245 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
LINC02000-201ENST00000483245 SPDYE2Q495Y8 402 aa17.34■□□□□ 0.37
LINC02000-201ENST00000483245 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
LINC02000-201ENST00000483245 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
LINC02000-201ENST00000483245 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
LINC02000-201ENST00000483245 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
LINC02000-201ENST00000483245 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC02000-201ENST00000483245 SPDYE1Q8NFV5 336 aaPredicted RBP16.99■□□□□ 0.31
LINC02000-201ENST00000483245 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
LINC02000-201ENST00000483245 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
LINC02000-201ENST00000483245 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
LINC02000-201ENST00000483245 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
LINC02000-201ENST00000483245 HAX1O00165 279 aa16.73■□□□□ 0.27
LINC02000-201ENST00000483245 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
LINC02000-201ENST00000483245 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
LINC02000-201ENST00000483245 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
LINC02000-201ENST00000483245 EVX2Q03828 476 aa16.55■□□□□ 0.24
LINC02000-201ENST00000483245 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
LINC02000-201ENST00000483245 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
LINC02000-201ENST00000483245 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
LINC02000-201ENST00000483245 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
LINC02000-201ENST00000483245 PROM2Q8N271 834 aa16.29■□□□□ 0.2
LINC02000-201ENST00000483245 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
LINC02000-201ENST00000483245 FKBP8Q14318 412 aa16.21■□□□□ 0.19
LINC02000-201ENST00000483245 GABBR2O75899 941 aa16.2■□□□□ 0.18
LINC02000-201ENST00000483245 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
LINC02000-201ENST00000483245 CLCN6P51797 869 aa16.06■□□□□ 0.16
LINC02000-201ENST00000483245 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
LINC02000-201ENST00000483245 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
LINC02000-201ENST00000483245 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
LINC02000-201ENST00000483245 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
LINC02000-201ENST00000483245 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
LINC02000-201ENST00000483245 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
LINC02000-201ENST00000483245 MIER1Q8N108 512 aa15.79■□□□□ 0.12
LINC02000-201ENST00000483245 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
LINC02000-201ENST00000483245 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
LINC02000-201ENST00000483245 DCBLD2Q96PD2 775 aa15.78■□□□□ 0.12
LINC02000-201ENST00000483245 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
LINC02000-201ENST00000483245 LHX8Q68G74 356 aa15.72■□□□□ 0.11
LINC02000-201ENST00000483245 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
LINC02000-201ENST00000483245 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
LINC02000-201ENST00000483245 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms