RNA–Protein interactions for RNA: ENST00000481431.1

LRP8-210, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-210ENST00000481431 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
LRP8-210ENST00000481431 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
LRP8-210ENST00000481431 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
LRP8-210ENST00000481431 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
LRP8-210ENST00000481431 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
LRP8-210ENST00000481431 FOXD1Q16676 465 aa14.23□□□□□ -0.13
LRP8-210ENST00000481431 ADRA2BP18089 450 aa14.14□□□□□ -0.15
LRP8-210ENST00000481431 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
LRP8-210ENST00000481431 NISCHQ9Y2I1 1504 aa13.84□□□□□ -0.19
LRP8-210ENST00000481431 KCNA4P22459 653 aa13.7□□□□□ -0.22
LRP8-210ENST00000481431 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
LRP8-210ENST00000481431 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
LRP8-210ENST00000481431 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
LRP8-210ENST00000481431 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
LRP8-210ENST00000481431 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
LRP8-210ENST00000481431 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
LRP8-210ENST00000481431 ABCC9O60706 1549 aa13.02□□□□□ -0.33
LRP8-210ENST00000481431 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
LRP8-210ENST00000481431 MSH5O43196 834 aa12.98□□□□□ -0.33
LRP8-210ENST00000481431 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
LRP8-210ENST00000481431 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
LRP8-210ENST00000481431 CCDC180Q9P1Z9 1646 aa12.71□□□□□ -0.37
LRP8-210ENST00000481431 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
LRP8-210ENST00000481431 ZBTB22O15209 634 aa12.56□□□□□ -0.4
LRP8-210ENST00000481431 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
LRP8-210ENST00000481431 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.41
LRP8-210ENST00000481431 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
LRP8-210ENST00000481431 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
LRP8-210ENST00000481431 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
LRP8-210ENST00000481431 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
LRP8-210ENST00000481431 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
LRP8-210ENST00000481431 NACADO15069 1562 aa12.06□□□□□ -0.48
LRP8-210ENST00000481431 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
LRP8-210ENST00000481431 UNC13AQ9UPW8 1703 aa12.01□□□□□ -0.49
LRP8-210ENST00000481431 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
LRP8-210ENST00000481431 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
LRP8-210ENST00000481431 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
LRP8-210ENST00000481431 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
LRP8-210ENST00000481431 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
LRP8-210ENST00000481431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
LRP8-210ENST00000481431 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
LRP8-210ENST00000481431 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
LRP8-210ENST00000481431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
LRP8-210ENST00000481431 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
LRP8-210ENST00000481431 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
LRP8-210ENST00000481431 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
LRP8-210ENST00000481431 FKBP8Q14318 412 aa11.75□□□□□ -0.53
LRP8-210ENST00000481431 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
LRP8-210ENST00000481431 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
LRP8-210ENST00000481431 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
LRP8-210ENST00000481431 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.54
LRP8-210ENST00000481431 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
LRP8-210ENST00000481431 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
LRP8-210ENST00000481431 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
LRP8-210ENST00000481431 APLP2Q06481 763 aa11.54□□□□□ -0.56
LRP8-210ENST00000481431 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
LRP8-210ENST00000481431 CUX2O14529 1486 aa11.45□□□□□ -0.58
LRP8-210ENST00000481431 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
LRP8-210ENST00000481431 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
LRP8-210ENST00000481431 ZCCHC6Q5VYS8 1495 aaKnown RBP11.4□□□□□ -0.58
LRP8-210ENST00000481431 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
LRP8-210ENST00000481431 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
LRP8-210ENST00000481431 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
LRP8-210ENST00000481431 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
LRP8-210ENST00000481431 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
LRP8-210ENST00000481431 FBLN2P98095 1184 aa11.23□□□□□ -0.61
LRP8-210ENST00000481431 CAPN15O75808 1086 aa11.15□□□□□ -0.62
LRP8-210ENST00000481431 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
LRP8-210ENST00000481431 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
LRP8-210ENST00000481431 POLA2Q14181 598 aa11.14□□□□□ -0.63
LRP8-210ENST00000481431 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
LRP8-210ENST00000481431 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
LRP8-210ENST00000481431 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
LRP8-210ENST00000481431 NCAPD3P42695 1498 aa11.11□□□□□ -0.63
LRP8-210ENST00000481431 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
LRP8-210ENST00000481431 NESP48681 1621 aa11.05□□□□□ -0.64
LRP8-210ENST00000481431 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
LRP8-210ENST00000481431 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
LRP8-210ENST00000481431 PROM2Q8N271 834 aa11.03□□□□□ -0.64
LRP8-210ENST00000481431 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
LRP8-210ENST00000481431 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
LRP8-210ENST00000481431 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
LRP8-210ENST00000481431 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
LRP8-210ENST00000481431 KIF21AQ7Z4S6 1674 aa10.96□□□□□ -0.65
LRP8-210ENST00000481431 ABCB7O75027 752 aa10.95□□□□□ -0.66
LRP8-210ENST00000481431 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
LRP8-210ENST00000481431 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
LRP8-210ENST00000481431 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
LRP8-210ENST00000481431 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
LRP8-210ENST00000481431 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
LRP8-210ENST00000481431 WDR62O43379 1518 aa10.84□□□□□ -0.67
LRP8-210ENST00000481431 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
LRP8-210ENST00000481431 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
LRP8-210ENST00000481431 MRC2Q9UBG0 1479 aa10.82□□□□□ -0.68
LRP8-210ENST00000481431 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
LRP8-210ENST00000481431 DSG3P32926 999 aa10.77□□□□□ -0.69
LRP8-210ENST00000481431 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
LRP8-210ENST00000481431 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
LRP8-210ENST00000481431 RIMBP3CA6NJZ7 1639 aa10.76□□□□□ -0.69
LRP8-210ENST00000481431 RIMBP3BA6NNM3 1639 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms