RNA–Protein interactions for RNA: ENST00000481223.6

CCNL2-213, Transcript of cyclin L2, humanhuman

TSL 2

Gene CCNL2, Length 2,815 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2-213ENST00000481223 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
CCNL2-213ENST00000481223 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.94
CCNL2-213ENST00000481223 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
CCNL2-213ENST00000481223 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
CCNL2-213ENST00000481223 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
CCNL2-213ENST00000481223 SUPT5HO00267 1087 aaKnown RBP32.6■■■□□ 2.81
CCNL2-213ENST00000481223 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
CCNL2-213ENST00000481223 ABCC9O60706 1549 aa31.44■■■□□ 2.62
CCNL2-213ENST00000481223 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
CCNL2-213ENST00000481223 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
CCNL2-213ENST00000481223 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
CCNL2-213ENST00000481223 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
CCNL2-213ENST00000481223 NACADO15069 1562 aa30.75■■■□□ 2.51
CCNL2-213ENST00000481223 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
CCNL2-213ENST00000481223 LOC105371045A0A1W2PR82 267 aa30.56■■■□□ 2.48
CCNL2-213ENST00000481223 HRCP23327 699 aa30.44■■■□□ 2.46
CCNL2-213ENST00000481223 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
CCNL2-213ENST00000481223 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.46
CCNL2-213ENST00000481223 PCGF6Q9BYE7 350 aa30.29■■■□□ 2.44
CCNL2-213ENST00000481223 PPARGC1BQ86YN6 1023 aaKnown RBP30.26■■■□□ 2.43
CCNL2-213ENST00000481223 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
CCNL2-213ENST00000481223 FAM9AQ8IZU1 332 aaPredicted RBP30.22■■■□□ 2.43
CCNL2-213ENST00000481223 WIZO95785 1651 aa30.19■■■□□ 2.42
CCNL2-213ENST00000481223 EHMT2Q96KQ7 1210 aa30.17■■■□□ 2.42
CCNL2-213ENST00000481223 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.421e-14■■□□□ 11.9
CCNL2-213ENST00000481223 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
CCNL2-213ENST00000481223 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
CCNL2-213ENST00000481223 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
CCNL2-213ENST00000481223 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
CCNL2-213ENST00000481223 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
CCNL2-213ENST00000481223 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
CCNL2-213ENST00000481223 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
CCNL2-213ENST00000481223 SMARCA2P51531 1590 aa29.46■■■□□ 2.31
CCNL2-213ENST00000481223 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
CCNL2-213ENST00000481223 TRIM26Q12899 539 aaPredicted RBP29.4■■■□□ 2.3
CCNL2-213ENST00000481223 SOGA1O94964 1423 aa29.17■■■□□ 2.26
CCNL2-213ENST00000481223 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
CCNL2-213ENST00000481223 RUSC2Q8N2Y8 1516 aa29.07■■■□□ 2.24
CCNL2-213ENST00000481223 BAZ1BQ9UIG0 1483 aaKnown RBP29.06■■■□□ 2.24
CCNL2-213ENST00000481223 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
CCNL2-213ENST00000481223 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
CCNL2-213ENST00000481223 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.22
CCNL2-213ENST00000481223 UBTFP17480 764 aaKnown RBP28.92■■■□□ 2.22
CCNL2-213ENST00000481223 CSRNP3Q8WYN3 585 aa28.91■■■□□ 2.22
CCNL2-213ENST00000481223 SYNJ1O43426 1573 aa28.8■■■□□ 2.2
CCNL2-213ENST00000481223 CEP162Q5TB80 1403 aa28.78■■■□□ 2.2
CCNL2-213ENST00000481223 SCAF1Q9H7N4 1312 aaKnown RBP28.75■■■□□ 2.19
CCNL2-213ENST00000481223 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
CCNL2-213ENST00000481223 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
CCNL2-213ENST00000481223 EEA1Q15075 1411 aa28.62■■■□□ 2.17
CCNL2-213ENST00000481223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.56■■■□□ 2.16
CCNL2-213ENST00000481223 GOLGA3Q08378 1498 aa28.55■■■□□ 2.16
CCNL2-213ENST00000481223 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
CCNL2-213ENST00000481223 ZEB1P37275 1124 aaPredicted RBP28.52■■■□□ 2.16
CCNL2-213ENST00000481223 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
CCNL2-213ENST00000481223 RAPGEF2Q9Y4G8 1499 aa28.42■■■□□ 2.14
CCNL2-213ENST00000481223 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
CCNL2-213ENST00000481223 PELP1Q8IZL8 1130 aaKnown RBP28.39■■■□□ 2.14
CCNL2-213ENST00000481223 CCER1Q8TC90 406 aaPredicted RBP28.36■■■□□ 2.13
CCNL2-213ENST00000481223 TOP2BQ02880 1626 aa28.35■■■□□ 2.13
CCNL2-213ENST00000481223 CLIP1P30622 1438 aa28.32■■■□□ 2.12
CCNL2-213ENST00000481223 CUX1P39880 1505 aa28.29■■■□□ 2.12
CCNL2-213ENST00000481223 CFTRP13569 1480 aa28.26■■■□□ 2.11
CCNL2-213ENST00000481223 KIF21BO75037 1637 aa28.26■■■□□ 2.11
CCNL2-213ENST00000481223 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
CCNL2-213ENST00000481223 NEUROD1Q13562 356 aa28.14■■■□□ 2.09
CCNL2-213ENST00000481223 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
CCNL2-213ENST00000481223 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
CCNL2-213ENST00000481223 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
CCNL2-213ENST00000481223 APLP2Q06481 763 aa28.08■■■□□ 2.09
CCNL2-213ENST00000481223 VPS8Q8N3P4 1428 aa28.07■■■□□ 2.08
CCNL2-213ENST00000481223 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
CCNL2-213ENST00000481223 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
CCNL2-213ENST00000481223 ACIN1Q9UKV3 1341 aaKnown RBP28.02■■■□□ 2.08
CCNL2-213ENST00000481223 CUX2O14529 1486 aa27.96■■■□□ 2.07
CCNL2-213ENST00000481223 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
CCNL2-213ENST00000481223 GTF3C3Q9Y5Q9 886 aa27.92■■■□□ 2.06
CCNL2-213ENST00000481223 NESP48681 1621 aa27.9■■■□□ 2.06
CCNL2-213ENST00000481223 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
CCNL2-213ENST00000481223 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
CCNL2-213ENST00000481223 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
CCNL2-213ENST00000481223 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
CCNL2-213ENST00000481223 IGF1RP08069 1367 aa27.84■■■□□ 2.05
CCNL2-213ENST00000481223 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
CCNL2-213ENST00000481223 DIEXFQ68CQ4 756 aaKnown RBP27.82■■■□□ 2.04
CCNL2-213ENST00000481223 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
CCNL2-213ENST00000481223 P3H3Q8IVL6 736 aa27.73■■■□□ 2.03
CCNL2-213ENST00000481223 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
CCNL2-213ENST00000481223 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
CCNL2-213ENST00000481223 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.02
CCNL2-213ENST00000481223 ITGAEP38570 1179 aa27.63■■■□□ 2.01
CCNL2-213ENST00000481223 YTHDC1Q96MU7 727 aaKnown RBP27.62■■■□□ 2.01
CCNL2-213ENST00000481223 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
CCNL2-213ENST00000481223 CENPBP07199 599 aaPredicted RBP27.6■■■□□ 2.01
CCNL2-213ENST00000481223 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
CCNL2-213ENST00000481223 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
CCNL2-213ENST00000481223 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
CCNL2-213ENST00000481223 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
CCNL2-213ENST00000481223 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
CCNL2-213ENST00000481223 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms