RNA–Protein interactions for RNA: ENST00000481003.1

PSMD1-210, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-210ENST00000481003 AEBP2Q6ZN18 517 aaPredicted RBP33.7■■■□□ 2.99
PSMD1-210ENST00000481003 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
PSMD1-210ENST00000481003 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
PSMD1-210ENST00000481003 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
PSMD1-210ENST00000481003 FOXD1Q16676 465 aa27.02■■□□□ 1.92
PSMD1-210ENST00000481003 POTEDQ86YR6 584 aa26.3■■□□□ 1.8
PSMD1-210ENST00000481003 MSH5O43196 834 aa25.58■■□□□ 1.69
PSMD1-210ENST00000481003 PIAS4Q8N2W9 510 aaPredicted RBP25.12■■□□□ 1.61
PSMD1-210ENST00000481003 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
PSMD1-210ENST00000481003 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
PSMD1-210ENST00000481003 ADRA2BP18089 450 aa24.57■■□□□ 1.52
PSMD1-210ENST00000481003 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
PSMD1-210ENST00000481003 DMRT2Q9Y5R5 561 aa22.76■■□□□ 1.23
PSMD1-210ENST00000481003 CACNB1Q02641 598 aaPredicted RBP22.49■■□□□ 1.19
PSMD1-210ENST00000481003 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
PSMD1-210ENST00000481003 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
PSMD1-210ENST00000481003 RNF39Q9H2S5 420 aa21.73■■□□□ 1.07
PSMD1-210ENST00000481003 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
PSMD1-210ENST00000481003 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
PSMD1-210ENST00000481003 C1QBPQ07021 282 aaKnown RBP21.37■■□□□ 1.01
PSMD1-210ENST00000481003 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
PSMD1-210ENST00000481003 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
PSMD1-210ENST00000481003 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
PSMD1-210ENST00000481003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.69■□□□□ 0.9
PSMD1-210ENST00000481003 POTEHQ6S545 545 aa20.48■□□□□ 0.87
PSMD1-210ENST00000481003 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
PSMD1-210ENST00000481003 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
PSMD1-210ENST00000481003 CAPN15O75808 1086 aa20.13■□□□□ 0.81
PSMD1-210ENST00000481003 DSG3P32926 999 aa20.11■□□□□ 0.81
PSMD1-210ENST00000481003 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
PSMD1-210ENST00000481003 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
PSMD1-210ENST00000481003 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
PSMD1-210ENST00000481003 ABCB7O75027 752 aa19.61■□□□□ 0.73
PSMD1-210ENST00000481003 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
PSMD1-210ENST00000481003 APLP2Q06481 763 aa19.47■□□□□ 0.71
PSMD1-210ENST00000481003 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
PSMD1-210ENST00000481003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
PSMD1-210ENST00000481003 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
PSMD1-210ENST00000481003 RBM42Q9BTD8 480 aaKnown RBP19.23■□□□□ 0.67
PSMD1-210ENST00000481003 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
PSMD1-210ENST00000481003 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
PSMD1-210ENST00000481003 KCNA4P22459 653 aa19.09■□□□□ 0.65
PSMD1-210ENST00000481003 POLA2Q14181 598 aa18.88■□□□□ 0.61
PSMD1-210ENST00000481003 SP7Q8TDD2 431 aaPredicted RBP18.82■□□□□ 0.6
PSMD1-210ENST00000481003 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
PSMD1-210ENST00000481003 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
PSMD1-210ENST00000481003 PIP4P2Q8N4L2 257 aa18.5■□□□□ 0.55
PSMD1-210ENST00000481003 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
PSMD1-210ENST00000481003 HAX1O00165 279 aa18.43■□□□□ 0.54
PSMD1-210ENST00000481003 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
PSMD1-210ENST00000481003 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PSMD1-210ENST00000481003 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
PSMD1-210ENST00000481003 PITPNM1O00562 1244 aa18.27■□□□□ 0.52
PSMD1-210ENST00000481003 FXR2P51116 673 aaKnown RBP eCLIP18.21■□□□□ 0.515e-14■■□□□ 13.2
PSMD1-210ENST00000481003 EVX2Q03828 476 aa18.09■□□□□ 0.49
PSMD1-210ENST00000481003 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
PSMD1-210ENST00000481003 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
PSMD1-210ENST00000481003 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
PSMD1-210ENST00000481003 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
PSMD1-210ENST00000481003 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
PSMD1-210ENST00000481003 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
PSMD1-210ENST00000481003 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
PSMD1-210ENST00000481003 C19orf67A6NJJ6 358 aa17.67■□□□□ 0.42
PSMD1-210ENST00000481003 FBLN2P98095 1184 aa17.66■□□□□ 0.42
PSMD1-210ENST00000481003 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
PSMD1-210ENST00000481003 GABBR2O75899 941 aa17.65■□□□□ 0.42
PSMD1-210ENST00000481003 LHX8Q68G74 356 aa17.65■□□□□ 0.42
PSMD1-210ENST00000481003 ZBTB22O15209 634 aa17.51■□□□□ 0.39
PSMD1-210ENST00000481003 ATXN8OSP0DMR3 200 aa17.49■□□□□ 0.39
PSMD1-210ENST00000481003 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
PSMD1-210ENST00000481003 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
PSMD1-210ENST00000481003 SSUH2Q9Y2M2 353 aa17.41■□□□□ 0.38
PSMD1-210ENST00000481003 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
PSMD1-210ENST00000481003 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
PSMD1-210ENST00000481003 PLSCR2Q9NRY7 297 aa17.28■□□□□ 0.36
PSMD1-210ENST00000481003 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
PSMD1-210ENST00000481003 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
PSMD1-210ENST00000481003 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
PSMD1-210ENST00000481003 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
PSMD1-210ENST00000481003 DCBLD2Q96PD2 775 aa17.06■□□□□ 0.32
PSMD1-210ENST00000481003 CLCN6P51797 869 aa17.02■□□□□ 0.32
PSMD1-210ENST00000481003 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
PSMD1-210ENST00000481003 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
PSMD1-210ENST00000481003 OTUD5Q96G74 571 aa16.76■□□□□ 0.27
PSMD1-210ENST00000481003 GALR2O43603 387 aaPredicted RBP16.75■□□□□ 0.27
PSMD1-210ENST00000481003 POTEMA6NI47 508 aa16.69■□□□□ 0.26
PSMD1-210ENST00000481003 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
PSMD1-210ENST00000481003 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
PSMD1-210ENST00000481003 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
PSMD1-210ENST00000481003 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
PSMD1-210ENST00000481003 PHF12Q96QT6 1004 aa16.55■□□□□ 0.24
PSMD1-210ENST00000481003 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
PSMD1-210ENST00000481003 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
PSMD1-210ENST00000481003 METRNQ9UJH8 293 aa16.38■□□□□ 0.21
PSMD1-210ENST00000481003 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
PSMD1-210ENST00000481003 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
PSMD1-210ENST00000481003 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
PSMD1-210ENST00000481003 SLC39A7Q92504 469 aa16.29■□□□□ 0.2
PSMD1-210ENST00000481003 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
PSMD1-210ENST00000481003 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms