RNA–Protein interactions for RNA: ENST00000480907.5

NUB1-208, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 5

Gene NUB1, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-208ENST00000480907 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
NUB1-208ENST00000480907 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
NUB1-208ENST00000480907 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
NUB1-208ENST00000480907 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
NUB1-208ENST00000480907 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
NUB1-208ENST00000480907 FOXD1Q16676 465 aa23.23■■□□□ 1.31
NUB1-208ENST00000480907 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
NUB1-208ENST00000480907 ADRA2BP18089 450 aa22.41■■□□□ 1.18
NUB1-208ENST00000480907 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
NUB1-208ENST00000480907 MSH5O43196 834 aa21.3■■□□□ 1
NUB1-208ENST00000480907 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
NUB1-208ENST00000480907 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
NUB1-208ENST00000480907 KCNA4P22459 653 aa20.38■□□□□ 0.85
NUB1-208ENST00000480907 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
NUB1-208ENST00000480907 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
NUB1-208ENST00000480907 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
NUB1-208ENST00000480907 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
NUB1-208ENST00000480907 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
NUB1-208ENST00000480907 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
NUB1-208ENST00000480907 HOXD11P31277 338 aaPredicted RBP19.62■□□□□ 0.73
NUB1-208ENST00000480907 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
NUB1-208ENST00000480907 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
NUB1-208ENST00000480907 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
NUB1-208ENST00000480907 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
NUB1-208ENST00000480907 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
NUB1-208ENST00000480907 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
NUB1-208ENST00000480907 ZBTB22O15209 634 aa18.81■□□□□ 0.6
NUB1-208ENST00000480907 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
NUB1-208ENST00000480907 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
NUB1-208ENST00000480907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
NUB1-208ENST00000480907 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
NUB1-208ENST00000480907 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
NUB1-208ENST00000480907 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
NUB1-208ENST00000480907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
NUB1-208ENST00000480907 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
NUB1-208ENST00000480907 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
NUB1-208ENST00000480907 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
NUB1-208ENST00000480907 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
NUB1-208ENST00000480907 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
NUB1-208ENST00000480907 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
NUB1-208ENST00000480907 APLP2Q06481 763 aa17.85■□□□□ 0.45
NUB1-208ENST00000480907 CAPN15O75808 1086 aa17.72■□□□□ 0.43
NUB1-208ENST00000480907 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
NUB1-208ENST00000480907 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
NUB1-208ENST00000480907 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
NUB1-208ENST00000480907 DSG3P32926 999 aa17.47■□□□□ 0.39
NUB1-208ENST00000480907 POLA2Q14181 598 aa17.43■□□□□ 0.38
NUB1-208ENST00000480907 ABCB7O75027 752 aa17.42■□□□□ 0.38
NUB1-208ENST00000480907 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
NUB1-208ENST00000480907 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
NUB1-208ENST00000480907 FBLN2P98095 1184 aa17.05■□□□□ 0.32
NUB1-208ENST00000480907 FKBP8Q14318 412 aa16.87■□□□□ 0.29
NUB1-208ENST00000480907 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
NUB1-208ENST00000480907 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
NUB1-208ENST00000480907 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
NUB1-208ENST00000480907 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
NUB1-208ENST00000480907 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
NUB1-208ENST00000480907 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
NUB1-208ENST00000480907 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
NUB1-208ENST00000480907 PROM2Q8N271 834 aa16.58■□□□□ 0.24
NUB1-208ENST00000480907 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
NUB1-208ENST00000480907 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUB1-208ENST00000480907 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
NUB1-208ENST00000480907 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
NUB1-208ENST00000480907 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
NUB1-208ENST00000480907 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
NUB1-208ENST00000480907 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
NUB1-208ENST00000480907 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
NUB1-208ENST00000480907 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
NUB1-208ENST00000480907 VASPP50552 380 aaPredicted RBP16.03■□□□□ 0.16
NUB1-208ENST00000480907 PRR29P0C7W0 189 aa15.93■□□□□ 0.14
NUB1-208ENST00000480907 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
NUB1-208ENST00000480907 IFNLR1Q8IU57 520 aaPredicted RBP15.86■□□□□ 0.13
NUB1-208ENST00000480907 MIER1Q8N108 512 aa15.85■□□□□ 0.13
NUB1-208ENST00000480907 CREBZFQ9NS37 354 aa15.83■□□□□ 0.12
NUB1-208ENST00000480907 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
NUB1-208ENST00000480907 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.124e-7■□□□□ 8.9
NUB1-208ENST00000480907 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
NUB1-208ENST00000480907 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
NUB1-208ENST00000480907 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
NUB1-208ENST00000480907 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
NUB1-208ENST00000480907 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
NUB1-208ENST00000480907 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
NUB1-208ENST00000480907 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
NUB1-208ENST00000480907 SPOCK2Q92563 424 aa15.59■□□□□ 0.09
NUB1-208ENST00000480907 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
NUB1-208ENST00000480907 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
NUB1-208ENST00000480907 NUBP1P53384 320 aa15.52■□□□□ 0.08
NUB1-208ENST00000480907 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
NUB1-208ENST00000480907 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
NUB1-208ENST00000480907 RASEFQ8IZ41 740 aa15.42■□□□□ 0.06
NUB1-208ENST00000480907 PKD2Q13563 968 aa15.37■□□□□ 0.05
NUB1-208ENST00000480907 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
NUB1-208ENST00000480907 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
NUB1-208ENST00000480907 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
NUB1-208ENST00000480907 GSE1Q14687 1217 aa15.28■□□□□ 0.04
NUB1-208ENST00000480907 POTEHQ6S545 545 aa15.27■□□□□ 0.04
NUB1-208ENST00000480907 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
NUB1-208ENST00000480907 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
NUB1-208ENST00000480907 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms