RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
RPN1-203ENST00000479113 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
RPN1-203ENST00000479113 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
RPN1-203ENST00000479113 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
RPN1-203ENST00000479113 FOXD1Q16676 465 aa13.61□□□□□ -0.23
RPN1-203ENST00000479113 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
RPN1-203ENST00000479113 MSH5O43196 834 aa12.81□□□□□ -0.36
RPN1-203ENST00000479113 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
RPN1-203ENST00000479113 ADRA2BP18089 450 aa12.77□□□□□ -0.37
RPN1-203ENST00000479113 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
RPN1-203ENST00000479113 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
RPN1-203ENST00000479113 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
RPN1-203ENST00000479113 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
RPN1-203ENST00000479113 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
RPN1-203ENST00000479113 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
RPN1-203ENST00000479113 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
RPN1-203ENST00000479113 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
RPN1-203ENST00000479113 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
RPN1-203ENST00000479113 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
RPN1-203ENST00000479113 KCNA4P22459 653 aa11.11□□□□□ -0.63
RPN1-203ENST00000479113 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
RPN1-203ENST00000479113 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
RPN1-203ENST00000479113 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
RPN1-203ENST00000479113 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
RPN1-203ENST00000479113 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
RPN1-203ENST00000479113 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
RPN1-203ENST00000479113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPN1-203ENST00000479113 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
RPN1-203ENST00000479113 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
RPN1-203ENST00000479113 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
RPN1-203ENST00000479113 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
RPN1-203ENST00000479113 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
RPN1-203ENST00000479113 CAPN15O75808 1086 aa10.26□□□□□ -0.77
RPN1-203ENST00000479113 ZBTB22O15209 634 aa10.25□□□□□ -0.77
RPN1-203ENST00000479113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
RPN1-203ENST00000479113 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
RPN1-203ENST00000479113 APLP2Q06481 763 aa10.22□□□□□ -0.77
RPN1-203ENST00000479113 DSG3P32926 999 aa10.21□□□□□ -0.77
RPN1-203ENST00000479113 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
RPN1-203ENST00000479113 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
RPN1-203ENST00000479113 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
RPN1-203ENST00000479113 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
RPN1-203ENST00000479113 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
RPN1-203ENST00000479113 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
RPN1-203ENST00000479113 ABCB7O75027 752 aa10□□□□□ -0.81
RPN1-203ENST00000479113 POLA2Q14181 598 aa9.88□□□□□ -0.83
RPN1-203ENST00000479113 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
RPN1-203ENST00000479113 ATF5Q9Y2D1 282 aaPredicted RBP9.87□□□□□ -0.83
RPN1-203ENST00000479113 POTEHQ6S545 545 aa9.86□□□□□ -0.83
RPN1-203ENST00000479113 ATXN8OSP0DMR3 200 aa9.8□□□□□ -0.84
RPN1-203ENST00000479113 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
RPN1-203ENST00000479113 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
RPN1-203ENST00000479113 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
RPN1-203ENST00000479113 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
RPN1-203ENST00000479113 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
RPN1-203ENST00000479113 FBLN2P98095 1184 aa9.5□□□□□ -0.89
RPN1-203ENST00000479113 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
RPN1-203ENST00000479113 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
RPN1-203ENST00000479113 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
RPN1-203ENST00000479113 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
RPN1-203ENST00000479113 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
RPN1-203ENST00000479113 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
RPN1-203ENST00000479113 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
RPN1-203ENST00000479113 SSUH2Q9Y2M2 353 aa9.29□□□□□ -0.92
RPN1-203ENST00000479113 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
RPN1-203ENST00000479113 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
RPN1-203ENST00000479113 SPDYE1Q8NFV5 336 aaPredicted RBP9.23□□□□□ -0.93
RPN1-203ENST00000479113 SP7Q8TDD2 431 aaPredicted RBP9.21□□□□□ -0.94
RPN1-203ENST00000479113 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
RPN1-203ENST00000479113 FKBP8Q14318 412 aa9.17□□□□□ -0.94
RPN1-203ENST00000479113 PABPN1Q86U42 306 aaKnown RBP eCLIP9.16□□□□□ -0.94
RPN1-203ENST00000479113 HAX1O00165 279 aa9.14□□□□□ -0.95
RPN1-203ENST00000479113 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
RPN1-203ENST00000479113 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
RPN1-203ENST00000479113 PRR29P0C7W0 189 aa9.07□□□□□ -0.96
RPN1-203ENST00000479113 PROM2Q8N271 834 aa9.02□□□□□ -0.97
RPN1-203ENST00000479113 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
RPN1-203ENST00000479113 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
RPN1-203ENST00000479113 EVX2Q03828 476 aa8.97□□□□□ -0.97
RPN1-203ENST00000479113 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
RPN1-203ENST00000479113 ABCC9O60706 1549 aa8.91□□□□□ -0.98
RPN1-203ENST00000479113 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
RPN1-203ENST00000479113 CCDC180Q9P1Z9 1646 aa8.87□□□□□ -0.99
RPN1-203ENST00000479113 CREBZFQ9NS37 354 aa8.86□□□□□ -0.99
RPN1-203ENST00000479113 GABBR2O75899 941 aa8.81□□□□□ -1
RPN1-203ENST00000479113 CD44P16070 742 aaKnown RBP8.8□□□□□ -1
RPN1-203ENST00000479113 FBXO3Q9UK99 471 aa8.79□□□□□ -1
RPN1-203ENST00000479113 CLCN6P51797 869 aa8.75□□□□□ -1.01
RPN1-203ENST00000479113 NPM1P06748 294 aaKnown RBP eCLIP8.72□□□□□ -1.01
RPN1-203ENST00000479113 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
RPN1-203ENST00000479113 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
RPN1-203ENST00000479113 ZRANB1Q9UGI0 708 aa8.69□□□□□ -1.02
RPN1-203ENST00000479113 ZNF579Q8NAF0 562 aaKnown RBP8.68□□□□□ -1.02
RPN1-203ENST00000479113 MIER1Q8N108 512 aa8.65□□□□□ -1.02
RPN1-203ENST00000479113 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
RPN1-203ENST00000479113 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
RPN1-203ENST00000479113 LHX8Q68G74 356 aa8.63□□□□□ -1.03
RPN1-203ENST00000479113 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
RPN1-203ENST00000479113 PLCD3Q8N3E9 789 aa8.62□□□□□ -1.03
RPN1-203ENST00000479113 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms