RNA–Protein interactions for RNA: ENST00000479056.1

ACTL6A-208, Transcript of actin like 6A, humanhuman

TSL 4

Gene ACTL6A, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-208ENST00000479056 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
ACTL6A-208ENST00000479056 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
ACTL6A-208ENST00000479056 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
ACTL6A-208ENST00000479056 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
ACTL6A-208ENST00000479056 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
ACTL6A-208ENST00000479056 FOXD1Q16676 465 aa22.38■■□□□ 1.17
ACTL6A-208ENST00000479056 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
ACTL6A-208ENST00000479056 ADRA2BP18089 450 aa21.57■■□□□ 1.04
ACTL6A-208ENST00000479056 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
ACTL6A-208ENST00000479056 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
ACTL6A-208ENST00000479056 MSH5O43196 834 aa20.64■□□□□ 0.89
ACTL6A-208ENST00000479056 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
ACTL6A-208ENST00000479056 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
ACTL6A-208ENST00000479056 KCNA4P22459 653 aa19.6■□□□□ 0.73
ACTL6A-208ENST00000479056 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
ACTL6A-208ENST00000479056 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
ACTL6A-208ENST00000479056 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
ACTL6A-208ENST00000479056 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
ACTL6A-208ENST00000479056 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
ACTL6A-208ENST00000479056 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
ACTL6A-208ENST00000479056 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
ACTL6A-208ENST00000479056 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
ACTL6A-208ENST00000479056 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
ACTL6A-208ENST00000479056 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
ACTL6A-208ENST00000479056 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
ACTL6A-208ENST00000479056 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
ACTL6A-208ENST00000479056 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
ACTL6A-208ENST00000479056 ZBTB22O15209 634 aa18.03■□□□□ 0.48
ACTL6A-208ENST00000479056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
ACTL6A-208ENST00000479056 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
ACTL6A-208ENST00000479056 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
ACTL6A-208ENST00000479056 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
ACTL6A-208ENST00000479056 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
ACTL6A-208ENST00000479056 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
ACTL6A-208ENST00000479056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
ACTL6A-208ENST00000479056 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
ACTL6A-208ENST00000479056 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
ACTL6A-208ENST00000479056 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
ACTL6A-208ENST00000479056 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
ACTL6A-208ENST00000479056 APLP2Q06481 763 aa17.39■□□□□ 0.37
ACTL6A-208ENST00000479056 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
ACTL6A-208ENST00000479056 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
ACTL6A-208ENST00000479056 CAPN15O75808 1086 aa17.14■□□□□ 0.33
ACTL6A-208ENST00000479056 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
ACTL6A-208ENST00000479056 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
ACTL6A-208ENST00000479056 DSG3P32926 999 aa16.84■□□□□ 0.29
ACTL6A-208ENST00000479056 POLA2Q14181 598 aa16.82■□□□□ 0.28
ACTL6A-208ENST00000479056 ABCB7O75027 752 aa16.8■□□□□ 0.28
ACTL6A-208ENST00000479056 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
ACTL6A-208ENST00000479056 FBLN2P98095 1184 aa16.55■□□□□ 0.24
ACTL6A-208ENST00000479056 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
ACTL6A-208ENST00000479056 FKBP8Q14318 412 aa16.27■□□□□ 0.2
ACTL6A-208ENST00000479056 POTEHQ6S545 545 aa16.26■□□□□ 0.19
ACTL6A-208ENST00000479056 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
ACTL6A-208ENST00000479056 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
ACTL6A-208ENST00000479056 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
ACTL6A-208ENST00000479056 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
ACTL6A-208ENST00000479056 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
ACTL6A-208ENST00000479056 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
ACTL6A-208ENST00000479056 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
ACTL6A-208ENST00000479056 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
ACTL6A-208ENST00000479056 PROM2Q8N271 834 aa15.96■□□□□ 0.15
ACTL6A-208ENST00000479056 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
ACTL6A-208ENST00000479056 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
ACTL6A-208ENST00000479056 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
ACTL6A-208ENST00000479056 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
ACTL6A-208ENST00000479056 SPDYE1Q8NFV5 336 aaPredicted RBP15.65■□□□□ 0.1
ACTL6A-208ENST00000479056 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
ACTL6A-208ENST00000479056 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
ACTL6A-208ENST00000479056 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
ACTL6A-208ENST00000479056 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
ACTL6A-208ENST00000479056 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
ACTL6A-208ENST00000479056 CHRDL2Q6WN34 429 aa15.35■□□□□ 0.05
ACTL6A-208ENST00000479056 MIER1Q8N108 512 aa15.33■□□□□ 0.04
ACTL6A-208ENST00000479056 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
ACTL6A-208ENST00000479056 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
ACTL6A-208ENST00000479056 IFNLR1Q8IU57 520 aaPredicted RBP15.25■□□□□ 0.03
ACTL6A-208ENST00000479056 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
ACTL6A-208ENST00000479056 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
ACTL6A-208ENST00000479056 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
ACTL6A-208ENST00000479056 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
ACTL6A-208ENST00000479056 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
ACTL6A-208ENST00000479056 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
ACTL6A-208ENST00000479056 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
ACTL6A-208ENST00000479056 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
ACTL6A-208ENST00000479056 SPOCK2Q92563 424 aa15.08■□□□□ 0
ACTL6A-208ENST00000479056 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
ACTL6A-208ENST00000479056 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
ACTL6A-208ENST00000479056 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
ACTL6A-208ENST00000479056 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
ACTL6A-208ENST00000479056 NUBP1P53384 320 aa14.94□□□□□ -0.02
ACTL6A-208ENST00000479056 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
ACTL6A-208ENST00000479056 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
ACTL6A-208ENST00000479056 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
ACTL6A-208ENST00000479056 GSE1Q14687 1217 aa14.82□□□□□ -0.04
ACTL6A-208ENST00000479056 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
ACTL6A-208ENST00000479056 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
ACTL6A-208ENST00000479056 PKD2Q13563 968 aa14.77□□□□□ -0.05
ACTL6A-208ENST00000479056 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
ACTL6A-208ENST00000479056 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 218.9 ms