RNA–Protein interactions for RNA: ENST00000478722.5

GPHN-203, Transcript of gephyrin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPHN, Length 4,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-203ENST00000478722 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
GPHN-203ENST00000478722 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
GPHN-203ENST00000478722 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
GPHN-203ENST00000478722 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
GPHN-203ENST00000478722 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
GPHN-203ENST00000478722 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
GPHN-203ENST00000478722 PCGF6Q9BYE7 350 aa21.06■□□□□ 0.96
GPHN-203ENST00000478722 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
GPHN-203ENST00000478722 TTBK1Q5TCY1 1321 aaPredicted RBP20.83■□□□□ 0.92
GPHN-203ENST00000478722 APLP2Q06481 763 aa20.77■□□□□ 0.91
GPHN-203ENST00000478722 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.88
GPHN-203ENST00000478722 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
GPHN-203ENST00000478722 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
GPHN-203ENST00000478722 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
GPHN-203ENST00000478722 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
GPHN-203ENST00000478722 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
GPHN-203ENST00000478722 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
GPHN-203ENST00000478722 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
GPHN-203ENST00000478722 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
GPHN-203ENST00000478722 HRCP23327 699 aa20.13■□□□□ 0.81
GPHN-203ENST00000478722 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
GPHN-203ENST00000478722 CENPBP07199 599 aaPredicted RBP20.02■□□□□ 0.8
GPHN-203ENST00000478722 ABCC9O60706 1549 aa19.97■□□□□ 0.79
GPHN-203ENST00000478722 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.76
GPHN-203ENST00000478722 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
GPHN-203ENST00000478722 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
GPHN-203ENST00000478722 ITGAEP38570 1179 aa19.75■□□□□ 0.75
GPHN-203ENST00000478722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
GPHN-203ENST00000478722 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
GPHN-203ENST00000478722 NEFLP07196 543 aa19.41■□□□□ 0.7
GPHN-203ENST00000478722 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
GPHN-203ENST00000478722 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
GPHN-203ENST00000478722 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
GPHN-203ENST00000478722 ERICH6Q7L0X2 663 aa19.28■□□□□ 0.68
GPHN-203ENST00000478722 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
GPHN-203ENST00000478722 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
GPHN-203ENST00000478722 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
GPHN-203ENST00000478722 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
GPHN-203ENST00000478722 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
GPHN-203ENST00000478722 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
GPHN-203ENST00000478722 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
GPHN-203ENST00000478722 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
GPHN-203ENST00000478722 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
GPHN-203ENST00000478722 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
GPHN-203ENST00000478722 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
GPHN-203ENST00000478722 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
GPHN-203ENST00000478722 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
GPHN-203ENST00000478722 FBLN2P98095 1184 aa18.88■□□□□ 0.61
GPHN-203ENST00000478722 ARID3CA6NKF2 412 aa18.88■□□□□ 0.61
GPHN-203ENST00000478722 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
GPHN-203ENST00000478722 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
GPHN-203ENST00000478722 ANP32CO43423 234 aa18.74■□□□□ 0.59
GPHN-203ENST00000478722 BCANQ96GW7 911 aa18.74■□□□□ 0.59
GPHN-203ENST00000478722 MYT1Q01538 1121 aa18.74■□□□□ 0.59
GPHN-203ENST00000478722 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
GPHN-203ENST00000478722 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
GPHN-203ENST00000478722 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
GPHN-203ENST00000478722 NACADO15069 1562 aa18.62■□□□□ 0.57
GPHN-203ENST00000478722 CLIP1P30622 1438 aa18.62■□□□□ 0.57
GPHN-203ENST00000478722 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
GPHN-203ENST00000478722 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
GPHN-203ENST00000478722 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
GPHN-203ENST00000478722 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
GPHN-203ENST00000478722 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.55
GPHN-203ENST00000478722 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
GPHN-203ENST00000478722 EEA1Q15075 1411 aa18.51■□□□□ 0.55
GPHN-203ENST00000478722 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
GPHN-203ENST00000478722 TONSLQ96HA7 1378 aa18.49■□□□□ 0.55
GPHN-203ENST00000478722 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
GPHN-203ENST00000478722 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
GPHN-203ENST00000478722 MIER1Q8N108 512 aa18.43■□□□□ 0.54
GPHN-203ENST00000478722 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
GPHN-203ENST00000478722 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
GPHN-203ENST00000478722 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
GPHN-203ENST00000478722 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
GPHN-203ENST00000478722 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
GPHN-203ENST00000478722 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
GPHN-203ENST00000478722 SOGA1O94964 1423 aa18.35■□□□□ 0.53
GPHN-203ENST00000478722 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
GPHN-203ENST00000478722 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
GPHN-203ENST00000478722 FKBP8Q14318 412 aa18.32■□□□□ 0.52
GPHN-203ENST00000478722 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
GPHN-203ENST00000478722 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
GPHN-203ENST00000478722 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
GPHN-203ENST00000478722 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
GPHN-203ENST00000478722 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
GPHN-203ENST00000478722 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
GPHN-203ENST00000478722 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
GPHN-203ENST00000478722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
GPHN-203ENST00000478722 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
GPHN-203ENST00000478722 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
GPHN-203ENST00000478722 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
GPHN-203ENST00000478722 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
GPHN-203ENST00000478722 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
GPHN-203ENST00000478722 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
GPHN-203ENST00000478722 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
GPHN-203ENST00000478722 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
GPHN-203ENST00000478722 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
GPHN-203ENST00000478722 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
GPHN-203ENST00000478722 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms