RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
AFF4-208ENST00000478588 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
AFF4-208ENST00000478588 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
AFF4-208ENST00000478588 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
AFF4-208ENST00000478588 FOXD1Q16676 465 aa19.65■□□□□ 0.74
AFF4-208ENST00000478588 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
AFF4-208ENST00000478588 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
AFF4-208ENST00000478588 ADRA2BP18089 450 aa18.79■□□□□ 0.6
AFF4-208ENST00000478588 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
AFF4-208ENST00000478588 MSH5O43196 834 aa18.08■□□□□ 0.48
AFF4-208ENST00000478588 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
AFF4-208ENST00000478588 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
AFF4-208ENST00000478588 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
AFF4-208ENST00000478588 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
AFF4-208ENST00000478588 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
AFF4-208ENST00000478588 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
AFF4-208ENST00000478588 KCNA4P22459 653 aa16.59■□□□□ 0.25
AFF4-208ENST00000478588 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
AFF4-208ENST00000478588 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
AFF4-208ENST00000478588 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
AFF4-208ENST00000478588 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
AFF4-208ENST00000478588 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
AFF4-208ENST00000478588 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
AFF4-208ENST00000478588 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
AFF4-208ENST00000478588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.093e-6■□□□□ 8.5
AFF4-208ENST00000478588 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
AFF4-208ENST00000478588 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
AFF4-208ENST00000478588 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
AFF4-208ENST00000478588 ZBTB22O15209 634 aa15.29■□□□□ 0.04
AFF4-208ENST00000478588 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
AFF4-208ENST00000478588 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
AFF4-208ENST00000478588 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
AFF4-208ENST00000478588 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
AFF4-208ENST00000478588 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
AFF4-208ENST00000478588 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
AFF4-208ENST00000478588 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
AFF4-208ENST00000478588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
AFF4-208ENST00000478588 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
AFF4-208ENST00000478588 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
AFF4-208ENST00000478588 CAPN15O75808 1086 aa14.94□□□□□ -0.02
AFF4-208ENST00000478588 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
AFF4-208ENST00000478588 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
AFF4-208ENST00000478588 APLP2Q06481 763 aa14.84□□□□□ -0.03
AFF4-208ENST00000478588 DSG3P32926 999 aa14.74□□□□□ -0.05
AFF4-208ENST00000478588 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
AFF4-208ENST00000478588 ABCB7O75027 752 aa14.69□□□□□ -0.06
AFF4-208ENST00000478588 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
AFF4-208ENST00000478588 POLA2Q14181 598 aa14.57□□□□□ -0.08
AFF4-208ENST00000478588 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
AFF4-208ENST00000478588 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
AFF4-208ENST00000478588 FBLN2P98095 1184 aa14.1□□□□□ -0.15
AFF4-208ENST00000478588 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
AFF4-208ENST00000478588 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
AFF4-208ENST00000478588 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
AFF4-208ENST00000478588 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
AFF4-208ENST00000478588 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
AFF4-208ENST00000478588 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
AFF4-208ENST00000478588 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
AFF4-208ENST00000478588 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
AFF4-208ENST00000478588 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
AFF4-208ENST00000478588 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
AFF4-208ENST00000478588 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
AFF4-208ENST00000478588 FKBP8Q14318 412 aa13.58□□□□□ -0.24
AFF4-208ENST00000478588 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
AFF4-208ENST00000478588 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
AFF4-208ENST00000478588 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
AFF4-208ENST00000478588 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
AFF4-208ENST00000478588 PROM2Q8N271 834 aa13.43□□□□□ -0.26
AFF4-208ENST00000478588 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
AFF4-208ENST00000478588 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
AFF4-208ENST00000478588 PRR29P0C7W0 189 aa13.31□□□□□ -0.28
AFF4-208ENST00000478588 POTEHQ6S545 545 aa13.31□□□□□ -0.28
AFF4-208ENST00000478588 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
AFF4-208ENST00000478588 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
AFF4-208ENST00000478588 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
AFF4-208ENST00000478588 CREBZFQ9NS37 354 aa13.13□□□□□ -0.31
AFF4-208ENST00000478588 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
AFF4-208ENST00000478588 MIER1Q8N108 512 aa13.04□□□□□ -0.32
AFF4-208ENST00000478588 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
AFF4-208ENST00000478588 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
AFF4-208ENST00000478588 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
AFF4-208ENST00000478588 HAX1O00165 279 aa12.95□□□□□ -0.34
AFF4-208ENST00000478588 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
AFF4-208ENST00000478588 EVX2Q03828 476 aa12.92□□□□□ -0.34
AFF4-208ENST00000478588 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
AFF4-208ENST00000478588 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
AFF4-208ENST00000478588 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
AFF4-208ENST00000478588 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
AFF4-208ENST00000478588 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
AFF4-208ENST00000478588 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
AFF4-208ENST00000478588 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
AFF4-208ENST00000478588 NUBP1P53384 320 aa12.73□□□□□ -0.37
AFF4-208ENST00000478588 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
AFF4-208ENST00000478588 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
AFF4-208ENST00000478588 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
AFF4-208ENST00000478588 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
AFF4-208ENST00000478588 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
AFF4-208ENST00000478588 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
AFF4-208ENST00000478588 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
AFF4-208ENST00000478588 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms