RNA–Protein interactions for RNA: ENST00000477868.1

CDC73-202, Transcript of cell division cycle 73, humanhuman

TSL 3

Gene CDC73, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC73-202ENST00000477868 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
CDC73-202ENST00000477868 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
CDC73-202ENST00000477868 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
CDC73-202ENST00000477868 SENP3Q9H4L4 574 aaPredicted RBP26.89■■□□□ 1.9
CDC73-202ENST00000477868 PLPPR3Q6T4P5 718 aa26.09■■□□□ 1.77
CDC73-202ENST00000477868 FOXD1Q16676 465 aa24.94■■□□□ 1.58
CDC73-202ENST00000477868 PPP6R1Q9UPN7 881 aa24.58■■□□□ 1.53
CDC73-202ENST00000477868 ADRA2BP18089 450 aa24.56■■□□□ 1.52
CDC73-202ENST00000477868 PIAS4Q8N2W9 510 aaPredicted RBP23.63■■□□□ 1.37
CDC73-202ENST00000477868 KCNA4P22459 653 aa23.38■■□□□ 1.33
CDC73-202ENST00000477868 PPP4R3CPQ6ZMV5 832 aa23.11■■□□□ 1.29
CDC73-202ENST00000477868 MSH5O43196 834 aa22.65■■□□□ 1.22
CDC73-202ENST00000477868 NCBP3Q53F19 620 aaKnown RBP22.62■■□□□ 1.21
CDC73-202ENST00000477868 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
CDC73-202ENST00000477868 NPM3O75607 178 aaKnown RBP22.39■■□□□ 1.17
CDC73-202ENST00000477868 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
CDC73-202ENST00000477868 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
CDC73-202ENST00000477868 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
CDC73-202ENST00000477868 MAPK8IP2Q13387 824 aaPredicted RBP22.1■■□□□ 1.13
CDC73-202ENST00000477868 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
CDC73-202ENST00000477868 RNF216Q9NWF9 866 aaPredicted RBP21.69■■□□□ 1.06
CDC73-202ENST00000477868 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
CDC73-202ENST00000477868 DMRT2Q9Y5R5 561 aa21.61■■□□□ 1.05
CDC73-202ENST00000477868 ZBTB22O15209 634 aa21.57■■□□□ 1.04
CDC73-202ENST00000477868 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
CDC73-202ENST00000477868 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
CDC73-202ENST00000477868 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
CDC73-202ENST00000477868 SLC4A2P04920 1241 aa21.01■□□□□ 0.95
CDC73-202ENST00000477868 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
CDC73-202ENST00000477868 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
CDC73-202ENST00000477868 ATXN8OSP0DMR3 200 aa20.46■□□□□ 0.87
CDC73-202ENST00000477868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.854e-7■□□□□ 10.5
CDC73-202ENST00000477868 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
CDC73-202ENST00000477868 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
CDC73-202ENST00000477868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
CDC73-202ENST00000477868 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
CDC73-202ENST00000477868 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
CDC73-202ENST00000477868 FKBP8Q14318 412 aa19.78■□□□□ 0.76
CDC73-202ENST00000477868 APLP2Q06481 763 aa19.66■□□□□ 0.74
CDC73-202ENST00000477868 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
CDC73-202ENST00000477868 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
CDC73-202ENST00000477868 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
CDC73-202ENST00000477868 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
CDC73-202ENST00000477868 C1QBPQ07021 282 aaKnown RBP19.29■□□□□ 0.68
CDC73-202ENST00000477868 MKRN4PQ13434 485 aaPredicted RBP19.27■□□□□ 0.68
CDC73-202ENST00000477868 CAPN15O75808 1086 aa19.25■□□□□ 0.67
CDC73-202ENST00000477868 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
CDC73-202ENST00000477868 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
CDC73-202ENST00000477868 POLA2Q14181 598 aa19.19■□□□□ 0.66
CDC73-202ENST00000477868 SPDYE4A6NLX3 237 aa19.09■□□□□ 0.65
CDC73-202ENST00000477868 FBLN2P98095 1184 aa19.09■□□□□ 0.65
CDC73-202ENST00000477868 ABCB7O75027 752 aa18.98■□□□□ 0.63
CDC73-202ENST00000477868 PROM2Q8N271 834 aa18.95■□□□□ 0.62
CDC73-202ENST00000477868 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
CDC73-202ENST00000477868 DSG3P32926 999 aa18.83■□□□□ 0.6
CDC73-202ENST00000477868 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
CDC73-202ENST00000477868 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
CDC73-202ENST00000477868 VASPP50552 380 aaPredicted RBP18.6■□□□□ 0.57
CDC73-202ENST00000477868 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
CDC73-202ENST00000477868 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
CDC73-202ENST00000477868 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
CDC73-202ENST00000477868 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
CDC73-202ENST00000477868 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
CDC73-202ENST00000477868 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.55
CDC73-202ENST00000477868 IFNLR1Q8IU57 520 aaPredicted RBP18.45■□□□□ 0.54
CDC73-202ENST00000477868 SSUH2Q9Y2M2 353 aa18.44■□□□□ 0.54
CDC73-202ENST00000477868 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDC73-202ENST00000477868 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
CDC73-202ENST00000477868 PKD2Q13563 968 aa18.11■□□□□ 0.49
CDC73-202ENST00000477868 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
CDC73-202ENST00000477868 SPOCK2Q92563 424 aa18.05■□□□□ 0.48
CDC73-202ENST00000477868 PLCD3Q8N3E9 789 aa18.03■□□□□ 0.48
CDC73-202ENST00000477868 MIER1Q8N108 512 aa18■□□□□ 0.47
CDC73-202ENST00000477868 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
CDC73-202ENST00000477868 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
CDC73-202ENST00000477868 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
CDC73-202ENST00000477868 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
CDC73-202ENST00000477868 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
CDC73-202ENST00000477868 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
CDC73-202ENST00000477868 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
CDC73-202ENST00000477868 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
CDC73-202ENST00000477868 RGL2O15211 777 aa17.66■□□□□ 0.42
CDC73-202ENST00000477868 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
CDC73-202ENST00000477868 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
CDC73-202ENST00000477868 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
CDC73-202ENST00000477868 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDC73-202ENST00000477868 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
CDC73-202ENST00000477868 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
CDC73-202ENST00000477868 NUBP1P53384 320 aa17.55■□□□□ 0.4
CDC73-202ENST00000477868 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
CDC73-202ENST00000477868 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
CDC73-202ENST00000477868 HAP1P54257 671 aaPredicted RBP17.48■□□□□ 0.39
CDC73-202ENST00000477868 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
CDC73-202ENST00000477868 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
CDC73-202ENST00000477868 GSE1Q14687 1217 aa17.45■□□□□ 0.38
CDC73-202ENST00000477868 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.41■□□□□ 0.38
CDC73-202ENST00000477868 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
CDC73-202ENST00000477868 RNF25Q96BH1 459 aaPredicted RBP17.37■□□□□ 0.37
CDC73-202ENST00000477868 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
CDC73-202ENST00000477868 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms