RNA–Protein interactions for RNA: ENST00000477642.5

ATL2-214, Transcript of atlastin GTPase 2, humanhuman

TSL 2

Gene ATL2, Length 764 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-214ENST00000477642 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
ATL2-214ENST00000477642 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
ATL2-214ENST00000477642 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
ATL2-214ENST00000477642 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
ATL2-214ENST00000477642 FOXD1Q16676 465 aa18.73■□□□□ 0.59
ATL2-214ENST00000477642 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
ATL2-214ENST00000477642 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
ATL2-214ENST00000477642 ADRA2BP18089 450 aa17.91■□□□□ 0.46
ATL2-214ENST00000477642 MSH5O43196 834 aa17.62■□□□□ 0.41
ATL2-214ENST00000477642 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
ATL2-214ENST00000477642 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
ATL2-214ENST00000477642 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
ATL2-214ENST00000477642 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
ATL2-214ENST00000477642 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
ATL2-214ENST00000477642 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
ATL2-214ENST00000477642 KCNA4P22459 653 aa15.97■□□□□ 0.15
ATL2-214ENST00000477642 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
ATL2-214ENST00000477642 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
ATL2-214ENST00000477642 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
ATL2-214ENST00000477642 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
ATL2-214ENST00000477642 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
ATL2-214ENST00000477642 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
ATL2-214ENST00000477642 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
ATL2-214ENST00000477642 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
ATL2-214ENST00000477642 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
ATL2-214ENST00000477642 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
ATL2-214ENST00000477642 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
ATL2-214ENST00000477642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
ATL2-214ENST00000477642 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
ATL2-214ENST00000477642 ZBTB22O15209 634 aa14.71□□□□□ -0.05
ATL2-214ENST00000477642 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
ATL2-214ENST00000477642 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
ATL2-214ENST00000477642 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
ATL2-214ENST00000477642 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
ATL2-214ENST00000477642 MYCNP04198 464 aaPredicted RBP14.51□□□□□ -0.09
ATL2-214ENST00000477642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
ATL2-214ENST00000477642 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
ATL2-214ENST00000477642 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
ATL2-214ENST00000477642 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
ATL2-214ENST00000477642 CAPN15O75808 1086 aa14.24□□□□□ -0.13
ATL2-214ENST00000477642 APLP2Q06481 763 aa14.22□□□□□ -0.13
ATL2-214ENST00000477642 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
ATL2-214ENST00000477642 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
ATL2-214ENST00000477642 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
ATL2-214ENST00000477642 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
ATL2-214ENST00000477642 DSG3P32926 999 aa14.03□□□□□ -0.16
ATL2-214ENST00000477642 ABCB7O75027 752 aa14□□□□□ -0.17
ATL2-214ENST00000477642 POLA2Q14181 598 aa13.89□□□□□ -0.19
ATL2-214ENST00000477642 POTEHQ6S545 545 aa13.7□□□□□ -0.22
ATL2-214ENST00000477642 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
ATL2-214ENST00000477642 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
ATL2-214ENST00000477642 FBLN2P98095 1184 aa13.52□□□□□ -0.25
ATL2-214ENST00000477642 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
ATL2-214ENST00000477642 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
ATL2-214ENST00000477642 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
ATL2-214ENST00000477642 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
ATL2-214ENST00000477642 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
ATL2-214ENST00000477642 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
ATL2-214ENST00000477642 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
ATL2-214ENST00000477642 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
ATL2-214ENST00000477642 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
ATL2-214ENST00000477642 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
ATL2-214ENST00000477642 FKBP8Q14318 412 aa13.12□□□□□ -0.31
ATL2-214ENST00000477642 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
ATL2-214ENST00000477642 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
ATL2-214ENST00000477642 PROM2Q8N271 834 aa12.94□□□□□ -0.34
ATL2-214ENST00000477642 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
ATL2-214ENST00000477642 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
ATL2-214ENST00000477642 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
ATL2-214ENST00000477642 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
ATL2-214ENST00000477642 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
ATL2-214ENST00000477642 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
ATL2-214ENST00000477642 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
ATL2-214ENST00000477642 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATL2-214ENST00000477642 HAX1O00165 279 aa12.61□□□□□ -0.39
ATL2-214ENST00000477642 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
ATL2-214ENST00000477642 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
ATL2-214ENST00000477642 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
ATL2-214ENST00000477642 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
ATL2-214ENST00000477642 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
ATL2-214ENST00000477642 MIER1Q8N108 512 aa12.49□□□□□ -0.41
ATL2-214ENST00000477642 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
ATL2-214ENST00000477642 MNX1P50219 401 aaPredicted RBP12.43□□□□□ -0.42
ATL2-214ENST00000477642 EVX2Q03828 476 aa12.42□□□□□ -0.42
ATL2-214ENST00000477642 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
ATL2-214ENST00000477642 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
ATL2-214ENST00000477642 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
ATL2-214ENST00000477642 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
ATL2-214ENST00000477642 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
ATL2-214ENST00000477642 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
ATL2-214ENST00000477642 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
ATL2-214ENST00000477642 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
ATL2-214ENST00000477642 NUBP1P53384 320 aa12.22□□□□□ -0.45
ATL2-214ENST00000477642 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
ATL2-214ENST00000477642 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
ATL2-214ENST00000477642 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
ATL2-214ENST00000477642 GABBR2O75899 941 aa12.14□□□□□ -0.47
ATL2-214ENST00000477642 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
ATL2-214ENST00000477642 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
ATL2-214ENST00000477642 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms