RNA–Protein interactions for RNA: ENST00000477148.1

TFRC-212, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-212ENST00000477148 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
TFRC-212ENST00000477148 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
TFRC-212ENST00000477148 PHF23Q9BUL5 403 aaPredicted RBP26.34■■□□□ 1.81
TFRC-212ENST00000477148 SENP3Q9H4L4 574 aaPredicted RBP26.09■■□□□ 1.77
TFRC-212ENST00000477148 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
TFRC-212ENST00000477148 FOXD1Q16676 465 aa24.14■■□□□ 1.45
TFRC-212ENST00000477148 ADRA2BP18089 450 aa23.24■■□□□ 1.31
TFRC-212ENST00000477148 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
TFRC-212ENST00000477148 PIAS4Q8N2W9 510 aaPredicted RBP22.83■■□□□ 1.25
TFRC-212ENST00000477148 MSH5O43196 834 aa22.32■■□□□ 1.16
TFRC-212ENST00000477148 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
TFRC-212ENST00000477148 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
TFRC-212ENST00000477148 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
TFRC-212ENST00000477148 KCNA4P22459 653 aa21.03■□□□□ 0.96
TFRC-212ENST00000477148 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
TFRC-212ENST00000477148 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
TFRC-212ENST00000477148 DMRT2Q9Y5R5 561 aa20.8■□□□□ 0.92
TFRC-212ENST00000477148 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
TFRC-212ENST00000477148 RNF216Q9NWF9 866 aaPredicted RBP20.49■□□□□ 0.87
TFRC-212ENST00000477148 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
TFRC-212ENST00000477148 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
TFRC-212ENST00000477148 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
TFRC-212ENST00000477148 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
TFRC-212ENST00000477148 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
TFRC-212ENST00000477148 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
TFRC-212ENST00000477148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
TFRC-212ENST00000477148 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
TFRC-212ENST00000477148 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
TFRC-212ENST00000477148 ZBTB22O15209 634 aa19.32■□□□□ 0.68
TFRC-212ENST00000477148 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
TFRC-212ENST00000477148 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
TFRC-212ENST00000477148 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
TFRC-212ENST00000477148 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
TFRC-212ENST00000477148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
TFRC-212ENST00000477148 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
TFRC-212ENST00000477148 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
TFRC-212ENST00000477148 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
TFRC-212ENST00000477148 APLP2Q06481 763 aa18.8■□□□□ 0.6
TFRC-212ENST00000477148 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
TFRC-212ENST00000477148 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
TFRC-212ENST00000477148 CAPN15O75808 1086 aa18.55■□□□□ 0.56
TFRC-212ENST00000477148 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
TFRC-212ENST00000477148 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
TFRC-212ENST00000477148 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
TFRC-212ENST00000477148 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
TFRC-212ENST00000477148 DSG3P32926 999 aa18.17■□□□□ 0.5
TFRC-212ENST00000477148 ABCB7O75027 752 aa18.16■□□□□ 0.5
TFRC-212ENST00000477148 POLA2Q14181 598 aa18.14■□□□□ 0.49
TFRC-212ENST00000477148 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
TFRC-212ENST00000477148 FBLN2P98095 1184 aa17.86■□□□□ 0.45
TFRC-212ENST00000477148 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
TFRC-212ENST00000477148 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
TFRC-212ENST00000477148 FKBP8Q14318 412 aa17.46■□□□□ 0.39
TFRC-212ENST00000477148 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
TFRC-212ENST00000477148 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
TFRC-212ENST00000477148 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
TFRC-212ENST00000477148 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
TFRC-212ENST00000477148 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
TFRC-212ENST00000477148 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
TFRC-212ENST00000477148 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
TFRC-212ENST00000477148 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
TFRC-212ENST00000477148 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
TFRC-212ENST00000477148 PROM2Q8N271 834 aa17.08■□□□□ 0.32
TFRC-212ENST00000477148 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
TFRC-212ENST00000477148 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
TFRC-212ENST00000477148 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
TFRC-212ENST00000477148 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
TFRC-212ENST00000477148 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
TFRC-212ENST00000477148 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
TFRC-212ENST00000477148 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
TFRC-212ENST00000477148 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
TFRC-212ENST00000477148 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
TFRC-212ENST00000477148 MIER1Q8N108 512 aa16.53■□□□□ 0.24
TFRC-212ENST00000477148 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
TFRC-212ENST00000477148 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
TFRC-212ENST00000477148 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
TFRC-212ENST00000477148 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
TFRC-212ENST00000477148 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
TFRC-212ENST00000477148 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
TFRC-212ENST00000477148 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
TFRC-212ENST00000477148 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
TFRC-212ENST00000477148 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
TFRC-212ENST00000477148 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
TFRC-212ENST00000477148 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
TFRC-212ENST00000477148 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
TFRC-212ENST00000477148 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
TFRC-212ENST00000477148 SPOCK2Q92563 424 aa16.2■□□□□ 0.18
TFRC-212ENST00000477148 NUBP1P53384 320 aa16.05■□□□□ 0.16
TFRC-212ENST00000477148 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
TFRC-212ENST00000477148 POTEHQ6S545 545 aa16.02■□□□□ 0.16
TFRC-212ENST00000477148 FAM212AQ96EL1 285 aa16■□□□□ 0.15
TFRC-212ENST00000477148 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
TFRC-212ENST00000477148 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
TFRC-212ENST00000477148 GSE1Q14687 1217 aa15.95■□□□□ 0.14
TFRC-212ENST00000477148 CIZ1Q9ULV3 898 aaPredicted RBP15.95■□□□□ 0.14
TFRC-212ENST00000477148 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
TFRC-212ENST00000477148 CD44P16070 742 aaKnown RBP15.91■□□□□ 0.14
TFRC-212ENST00000477148 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
TFRC-212ENST00000477148 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
TFRC-212ENST00000477148 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms