RNA–Protein interactions for RNA: ENST00000477112.1

DDX17-208, Transcript of DEAD-box helicase 17, humanhuman

TSL 2

Gene DDX17, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-208ENST00000477112 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
DDX17-208ENST00000477112 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
DDX17-208ENST00000477112 SENP3Q9H4L4 574 aaPredicted RBP15.8■□□□□ 0.12
DDX17-208ENST00000477112 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
DDX17-208ENST00000477112 FOXD1Q16676 465 aa14.73□□□□□ -0.05
DDX17-208ENST00000477112 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
DDX17-208ENST00000477112 MSH5O43196 834 aa14.09□□□□□ -0.15
DDX17-208ENST00000477112 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
DDX17-208ENST00000477112 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
DDX17-208ENST00000477112 ADRA2BP18089 450 aa13.28□□□□□ -0.28
DDX17-208ENST00000477112 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
DDX17-208ENST00000477112 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
DDX17-208ENST00000477112 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
DDX17-208ENST00000477112 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
DDX17-208ENST00000477112 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
DDX17-208ENST00000477112 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
DDX17-208ENST00000477112 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
DDX17-208ENST00000477112 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
DDX17-208ENST00000477112 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
DDX17-208ENST00000477112 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
DDX17-208ENST00000477112 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
DDX17-208ENST00000477112 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
DDX17-208ENST00000477112 POTEHQ6S545 545 aa11.41□□□□□ -0.58
DDX17-208ENST00000477112 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
DDX17-208ENST00000477112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.611e-9■□□□□ 10.2
DDX17-208ENST00000477112 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
DDX17-208ENST00000477112 CAPN15O75808 1086 aa10.99□□□□□ -0.65
DDX17-208ENST00000477112 DSG3P32926 999 aa10.96□□□□□ -0.65
DDX17-208ENST00000477112 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
DDX17-208ENST00000477112 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
DDX17-208ENST00000477112 NPM3O75607 178 aaKnown RBP10.73□□□□□ -0.69
DDX17-208ENST00000477112 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
DDX17-208ENST00000477112 ABCB7O75027 752 aa10.64□□□□□ -0.71
DDX17-208ENST00000477112 APLP2Q06481 763 aa10.64□□□□□ -0.71
DDX17-208ENST00000477112 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
DDX17-208ENST00000477112 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
DDX17-208ENST00000477112 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
DDX17-208ENST00000477112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.73
DDX17-208ENST00000477112 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.73
DDX17-208ENST00000477112 SP7Q8TDD2 431 aaPredicted RBP10.43□□□□□ -0.74
DDX17-208ENST00000477112 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
DDX17-208ENST00000477112 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
DDX17-208ENST00000477112 POLA2Q14181 598 aa10.2□□□□□ -0.78
DDX17-208ENST00000477112 HAX1O00165 279 aa10.18□□□□□ -0.78
DDX17-208ENST00000477112 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
DDX17-208ENST00000477112 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
DDX17-208ENST00000477112 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
DDX17-208ENST00000477112 KCNA4P22459 653 aa10.01□□□□□ -0.81
DDX17-208ENST00000477112 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
DDX17-208ENST00000477112 MYCNP04198 464 aaPredicted RBP9.99□□□□□ -0.81
DDX17-208ENST00000477112 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.828e-7■□□□□ 11.2
DDX17-208ENST00000477112 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
DDX17-208ENST00000477112 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
DDX17-208ENST00000477112 EVX2Q03828 476 aa9.87□□□□□ -0.83
DDX17-208ENST00000477112 LHX8Q68G74 356 aa9.8□□□□□ -0.84
DDX17-208ENST00000477112 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
DDX17-208ENST00000477112 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
DDX17-208ENST00000477112 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.86
DDX17-208ENST00000477112 GABBR2O75899 941 aa9.68□□□□□ -0.86
DDX17-208ENST00000477112 C19orf67A6NJJ6 358 aa9.66□□□□□ -0.86
DDX17-208ENST00000477112 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
DDX17-208ENST00000477112 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
DDX17-208ENST00000477112 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
DDX17-208ENST00000477112 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
DDX17-208ENST00000477112 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
DDX17-208ENST00000477112 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
DDX17-208ENST00000477112 FBLN2P98095 1184 aa9.54□□□□□ -0.88
DDX17-208ENST00000477112 CHADLQ6NUI6 762 aa9.46□□□□□ -0.9
DDX17-208ENST00000477112 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
DDX17-208ENST00000477112 PRR29P0C7W0 189 aa9.4□□□□□ -0.9
DDX17-208ENST00000477112 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
DDX17-208ENST00000477112 SLC4A1APQ9BWU0 796 aaKnown RBP9.4□□□□□ -0.9
DDX17-208ENST00000477112 CLCN6P51797 869 aa9.39□□□□□ -0.91
DDX17-208ENST00000477112 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
DDX17-208ENST00000477112 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
DDX17-208ENST00000477112 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
DDX17-208ENST00000477112 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
DDX17-208ENST00000477112 FARP1Q9Y4F1 1045 aaPredicted RBP9.27□□□□□ -0.93
DDX17-208ENST00000477112 POTEMA6NI47 508 aa9.25□□□□□ -0.93
DDX17-208ENST00000477112 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
DDX17-208ENST00000477112 MKRN4PQ13434 485 aaPredicted RBP9.24□□□□□ -0.93
DDX17-208ENST00000477112 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
DDX17-208ENST00000477112 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
DDX17-208ENST00000477112 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
DDX17-208ENST00000477112 ZRANB1Q9UGI0 708 aa9.17□□□□□ -0.94
DDX17-208ENST00000477112 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
DDX17-208ENST00000477112 ZBTB22O15209 634 aa9.13□□□□□ -0.95
DDX17-208ENST00000477112 POTEB2H3BUK9 544 aa9.08□□□□□ -0.96
DDX17-208ENST00000477112 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
DDX17-208ENST00000477112 PAK3O75914 559 aaPredicted RBP9.04□□□□□ -0.96
DDX17-208ENST00000477112 MAMSTRQ6ZN01 415 aa8.99□□□□□ -0.97
DDX17-208ENST00000477112 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
DDX17-208ENST00000477112 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
DDX17-208ENST00000477112 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
DDX17-208ENST00000477112 PELP1Q8IZL8 1130 aaKnown RBP8.93□□□□□ -0.98
DDX17-208ENST00000477112 CREBZFQ9NS37 354 aa8.93□□□□□ -0.98
DDX17-208ENST00000477112 C7P10643 843 aa8.92□□□□□ -0.98
DDX17-208ENST00000477112 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
DDX17-208ENST00000477112 STAG3Q9UJ98 1225 aa8.92□□□□□ -0.98
DDX17-208ENST00000477112 SCUBE2Q9NQ36 999 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms