RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 AEBP2Q6ZN18 517 aaPredicted RBP28.64■■■□□ 2.18
CCNL1-218ENST00000476744 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
CCNL1-218ENST00000476744 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
CCNL1-218ENST00000476744 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
CCNL1-218ENST00000476744 FOXD1Q16676 465 aa22.64■■□□□ 1.21
CCNL1-218ENST00000476744 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
CCNL1-218ENST00000476744 ADRA2BP18089 450 aa21.58■■□□□ 1.05
CCNL1-218ENST00000476744 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
CCNL1-218ENST00000476744 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
CCNL1-218ENST00000476744 MSH5O43196 834 aa21.03■□□□□ 0.96
CCNL1-218ENST00000476744 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
CCNL1-218ENST00000476744 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
CCNL1-218ENST00000476744 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
CCNL1-218ENST00000476744 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
CCNL1-218ENST00000476744 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
CCNL1-218ENST00000476744 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
CCNL1-218ENST00000476744 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
CCNL1-218ENST00000476744 KCNA4P22459 653 aa19.02■□□□□ 0.64
CCNL1-218ENST00000476744 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
CCNL1-218ENST00000476744 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
CCNL1-218ENST00000476744 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
CCNL1-218ENST00000476744 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
CCNL1-218ENST00000476744 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
CCNL1-218ENST00000476744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■■□□ 15
CCNL1-218ENST00000476744 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
CCNL1-218ENST00000476744 RNF39Q9H2S5 420 aa17.96■□□□□ 0.47
CCNL1-218ENST00000476744 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
CCNL1-218ENST00000476744 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
CCNL1-218ENST00000476744 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
CCNL1-218ENST00000476744 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
CCNL1-218ENST00000476744 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
CCNL1-218ENST00000476744 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
CCNL1-218ENST00000476744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
CCNL1-218ENST00000476744 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
CCNL1-218ENST00000476744 ZBTB22O15209 634 aa17.46■□□□□ 0.39
CCNL1-218ENST00000476744 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-218ENST00000476744 APLP2Q06481 763 aa17.37■□□□□ 0.37
CCNL1-218ENST00000476744 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
CCNL1-218ENST00000476744 CAPN15O75808 1086 aa17.3■□□□□ 0.36
CCNL1-218ENST00000476744 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
CCNL1-218ENST00000476744 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
CCNL1-218ENST00000476744 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
CCNL1-218ENST00000476744 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
CCNL1-218ENST00000476744 DSG3P32926 999 aa17■□□□□ 0.31
CCNL1-218ENST00000476744 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
CCNL1-218ENST00000476744 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
CCNL1-218ENST00000476744 ABCB7O75027 752 aa16.94■□□□□ 0.3
CCNL1-218ENST00000476744 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
CCNL1-218ENST00000476744 POLA2Q14181 598 aa16.79■□□□□ 0.28
CCNL1-218ENST00000476744 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-218ENST00000476744 FBLN2P98095 1184 aa16.37■□□□□ 0.21
CCNL1-218ENST00000476744 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
CCNL1-218ENST00000476744 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
CCNL1-218ENST00000476744 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-218ENST00000476744 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
CCNL1-218ENST00000476744 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
CCNL1-218ENST00000476744 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
CCNL1-218ENST00000476744 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
CCNL1-218ENST00000476744 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
CCNL1-218ENST00000476744 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
CCNL1-218ENST00000476744 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
CCNL1-218ENST00000476744 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
CCNL1-218ENST00000476744 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCNL1-218ENST00000476744 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
CCNL1-218ENST00000476744 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
CCNL1-218ENST00000476744 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
CCNL1-218ENST00000476744 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
CCNL1-218ENST00000476744 FKBP8Q14318 412 aa15.6■□□□□ 0.09
CCNL1-218ENST00000476744 POTEHQ6S545 545 aa15.45■□□□□ 0.06
CCNL1-218ENST00000476744 PROM2Q8N271 834 aa15.44■□□□□ 0.06
CCNL1-218ENST00000476744 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
CCNL1-218ENST00000476744 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
CCNL1-218ENST00000476744 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
CCNL1-218ENST00000476744 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCNL1-218ENST00000476744 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
CCNL1-218ENST00000476744 CHADLQ6NUI6 762 aa15.22■□□□□ 0.03
CCNL1-218ENST00000476744 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
CCNL1-218ENST00000476744 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
CCNL1-218ENST00000476744 MIER1Q8N108 512 aa15.04■□□□□ -0
CCNL1-218ENST00000476744 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
CCNL1-218ENST00000476744 PLEKHG5O94827 1062 aa15.03■□□□□ -0
CCNL1-218ENST00000476744 HAX1O00165 279 aa15.01□□□□□ -0.01
CCNL1-218ENST00000476744 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
CCNL1-218ENST00000476744 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCNL1-218ENST00000476744 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
CCNL1-218ENST00000476744 MNX1P50219 401 aaPredicted RBP14.89□□□□□ -0.03
CCNL1-218ENST00000476744 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
CCNL1-218ENST00000476744 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
CCNL1-218ENST00000476744 CD44P16070 742 aaKnown RBP14.83□□□□□ -0.04
CCNL1-218ENST00000476744 EVX2Q03828 476 aa14.78□□□□□ -0.04
CCNL1-218ENST00000476744 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
CCNL1-218ENST00000476744 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
CCNL1-218ENST00000476744 SP7Q8TDD2 431 aaPredicted RBP14.75□□□□□ -0.05
CCNL1-218ENST00000476744 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
CCNL1-218ENST00000476744 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
CCNL1-218ENST00000476744 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-218ENST00000476744 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-218ENST00000476744 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
CCNL1-218ENST00000476744 NUBP1P53384 320 aa14.62□□□□□ -0.07
CCNL1-218ENST00000476744 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms