RNA–Protein interactions for RNA: ENST00000476543.1

AC108729.2-201, humanhuman

BASIC

Gene AC108729.2, Length 840 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108729.2-201ENST00000476543 AEBP2Q6ZN18 517 aaPredicted RBP33.17■■■□□ 2.9
AC108729.2-201ENST00000476543 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
AC108729.2-201ENST00000476543 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
AC108729.2-201ENST00000476543 PHF23Q9BUL5 403 aaPredicted RBP27.95■■■□□ 2.06
AC108729.2-201ENST00000476543 FOXD1Q16676 465 aa26.52■■□□□ 1.84
AC108729.2-201ENST00000476543 POTEDQ86YR6 584 aa25.36■■□□□ 1.65
AC108729.2-201ENST00000476543 MSH5O43196 834 aa25.02■■□□□ 1.6
AC108729.2-201ENST00000476543 PIAS4Q8N2W9 510 aaPredicted RBP24.67■■□□□ 1.54
AC108729.2-201ENST00000476543 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
AC108729.2-201ENST00000476543 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
AC108729.2-201ENST00000476543 ADRA2BP18089 450 aa24.3■■□□□ 1.48
AC108729.2-201ENST00000476543 MAPK8IP2Q13387 824 aaPredicted RBP22.49■■□□□ 1.19
AC108729.2-201ENST00000476543 DMRT2Q9Y5R5 561 aa22.41■■□□□ 1.18
AC108729.2-201ENST00000476543 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
AC108729.2-201ENST00000476543 CACNB1Q02641 598 aaPredicted RBP21.85■■□□□ 1.09
AC108729.2-201ENST00000476543 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
AC108729.2-201ENST00000476543 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
AC108729.2-201ENST00000476543 HOXD11P31277 338 aaPredicted RBP21.35■■□□□ 1.01
AC108729.2-201ENST00000476543 RNF39Q9H2S5 420 aa21.29■■□□□ 1
AC108729.2-201ENST00000476543 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
AC108729.2-201ENST00000476543 RNF216Q9NWF9 866 aaPredicted RBP21.06■□□□□ 0.96
AC108729.2-201ENST00000476543 C1QBPQ07021 282 aaKnown RBP20.95■□□□□ 0.94
AC108729.2-201ENST00000476543 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
AC108729.2-201ENST00000476543 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
AC108729.2-201ENST00000476543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
AC108729.2-201ENST00000476543 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
AC108729.2-201ENST00000476543 U3KPZ7 1027 aaPredicted RBP19.88■□□□□ 0.77
AC108729.2-201ENST00000476543 CAPN15O75808 1086 aa19.8■□□□□ 0.76
AC108729.2-201ENST00000476543 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
AC108729.2-201ENST00000476543 DSG3P32926 999 aa19.77■□□□□ 0.76
AC108729.2-201ENST00000476543 POTEHQ6S545 545 aa19.77■□□□□ 0.76
AC108729.2-201ENST00000476543 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
AC108729.2-201ENST00000476543 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
AC108729.2-201ENST00000476543 ABCB7O75027 752 aa19.31■□□□□ 0.68
AC108729.2-201ENST00000476543 KCNA4P22459 653 aa19.29■□□□□ 0.68
AC108729.2-201ENST00000476543 APLP2Q06481 763 aa19.27■□□□□ 0.68
AC108729.2-201ENST00000476543 ZNF219Q9P2Y4 722 aaPredicted RBP19.26■□□□□ 0.67
AC108729.2-201ENST00000476543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
AC108729.2-201ENST00000476543 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
AC108729.2-201ENST00000476543 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
AC108729.2-201ENST00000476543 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
AC108729.2-201ENST00000476543 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
AC108729.2-201ENST00000476543 POLA2Q14181 598 aa18.69■□□□□ 0.58
AC108729.2-201ENST00000476543 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
AC108729.2-201ENST00000476543 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
AC108729.2-201ENST00000476543 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
AC108729.2-201ENST00000476543 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
AC108729.2-201ENST00000476543 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
AC108729.2-201ENST00000476543 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
AC108729.2-201ENST00000476543 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
AC108729.2-201ENST00000476543 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
AC108729.2-201ENST00000476543 PIP4P2Q8N4L2 257 aa18.13■□□□□ 0.49
AC108729.2-201ENST00000476543 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
AC108729.2-201ENST00000476543 HAX1O00165 279 aa17.99■□□□□ 0.47
AC108729.2-201ENST00000476543 PITPNM1O00562 1244 aa17.99■□□□□ 0.47
AC108729.2-201ENST00000476543 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
AC108729.2-201ENST00000476543 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
AC108729.2-201ENST00000476543 ZBTB22O15209 634 aa17.71■□□□□ 0.43
AC108729.2-201ENST00000476543 EVX2Q03828 476 aa17.7■□□□□ 0.42
AC108729.2-201ENST00000476543 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
AC108729.2-201ENST00000476543 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
AC108729.2-201ENST00000476543 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
AC108729.2-201ENST00000476543 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
AC108729.2-201ENST00000476543 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
AC108729.2-201ENST00000476543 FBLN2P98095 1184 aa17.59■□□□□ 0.41
AC108729.2-201ENST00000476543 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
AC108729.2-201ENST00000476543 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
AC108729.2-201ENST00000476543 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
AC108729.2-201ENST00000476543 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
AC108729.2-201ENST00000476543 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
AC108729.2-201ENST00000476543 C19orf67A6NJJ6 358 aa17.36■□□□□ 0.37
AC108729.2-201ENST00000476543 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
AC108729.2-201ENST00000476543 GABBR2O75899 941 aa17.26■□□□□ 0.35
AC108729.2-201ENST00000476543 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
AC108729.2-201ENST00000476543 LHX8Q68G74 356 aa17.15■□□□□ 0.34
AC108729.2-201ENST00000476543 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
AC108729.2-201ENST00000476543 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC108729.2-201ENST00000476543 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
AC108729.2-201ENST00000476543 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
AC108729.2-201ENST00000476543 POTEIP0CG38 1075 aa16.88■□□□□ 0.29
AC108729.2-201ENST00000476543 CLCN6P51797 869 aa16.76■□□□□ 0.27
AC108729.2-201ENST00000476543 DCBLD2Q96PD2 775 aa16.71■□□□□ 0.27
AC108729.2-201ENST00000476543 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
AC108729.2-201ENST00000476543 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
AC108729.2-201ENST00000476543 PLSCR2Q9NRY7 297 aa16.55■□□□□ 0.24
AC108729.2-201ENST00000476543 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
AC108729.2-201ENST00000476543 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
AC108729.2-201ENST00000476543 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
AC108729.2-201ENST00000476543 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
AC108729.2-201ENST00000476543 OTUD5Q96G74 571 aa16.37■□□□□ 0.21
AC108729.2-201ENST00000476543 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
AC108729.2-201ENST00000476543 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
AC108729.2-201ENST00000476543 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
AC108729.2-201ENST00000476543 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
AC108729.2-201ENST00000476543 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
AC108729.2-201ENST00000476543 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
AC108729.2-201ENST00000476543 POTEMA6NI47 508 aa16.17■□□□□ 0.18
AC108729.2-201ENST00000476543 POTEGQ6S5H5 508 aa16.12■□□□□ 0.17
AC108729.2-201ENST00000476543 MS4A3Q96HJ5 214 aa16.1■□□□□ 0.17
AC108729.2-201ENST00000476543 METRNQ9UJH8 293 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms