RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
TRA2A-205ENST00000475970 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
TRA2A-205ENST00000475970 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
TRA2A-205ENST00000475970 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-205ENST00000475970 FOXD1Q16676 465 aa17.2■□□□□ 0.34
TRA2A-205ENST00000475970 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
TRA2A-205ENST00000475970 MSH5O43196 834 aa16.19■□□□□ 0.18
TRA2A-205ENST00000475970 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
TRA2A-205ENST00000475970 ADRA2BP18089 450 aa16.06■□□□□ 0.16
TRA2A-205ENST00000475970 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
TRA2A-205ENST00000475970 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
TRA2A-205ENST00000475970 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
TRA2A-205ENST00000475970 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
TRA2A-205ENST00000475970 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
TRA2A-205ENST00000475970 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
TRA2A-205ENST00000475970 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
TRA2A-205ENST00000475970 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
TRA2A-205ENST00000475970 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
TRA2A-205ENST00000475970 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
TRA2A-205ENST00000475970 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
TRA2A-205ENST00000475970 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-205ENST00000475970 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
TRA2A-205ENST00000475970 KCNA4P22459 653 aa13.73□□□□□ -0.21
TRA2A-205ENST00000475970 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
TRA2A-205ENST00000475970 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
TRA2A-205ENST00000475970 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
TRA2A-205ENST00000475970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRA2A-205ENST00000475970 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-205ENST00000475970 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
TRA2A-205ENST00000475970 CAPN15O75808 1086 aa13.05□□□□□ -0.32
TRA2A-205ENST00000475970 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
TRA2A-205ENST00000475970 APLP2Q06481 763 aa12.99□□□□□ -0.33
TRA2A-205ENST00000475970 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
TRA2A-205ENST00000475970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
TRA2A-205ENST00000475970 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
TRA2A-205ENST00000475970 DSG3P32926 999 aa12.88□□□□□ -0.35
TRA2A-205ENST00000475970 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-205ENST00000475970 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-205ENST00000475970 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
TRA2A-205ENST00000475970 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
TRA2A-205ENST00000475970 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
TRA2A-205ENST00000475970 ABCB7O75027 752 aa12.7□□□□□ -0.38
TRA2A-205ENST00000475970 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
TRA2A-205ENST00000475970 ZBTB22O15209 634 aa12.63□□□□□ -0.39
TRA2A-205ENST00000475970 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
TRA2A-205ENST00000475970 POLA2Q14181 598 aa12.47□□□□□ -0.41
TRA2A-205ENST00000475970 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
TRA2A-205ENST00000475970 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-205ENST00000475970 POTEHQ6S545 545 aa12.31□□□□□ -0.44
TRA2A-205ENST00000475970 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
TRA2A-205ENST00000475970 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
TRA2A-205ENST00000475970 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
TRA2A-205ENST00000475970 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
TRA2A-205ENST00000475970 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
TRA2A-205ENST00000475970 FBLN2P98095 1184 aa12.02□□□□□ -0.49
TRA2A-205ENST00000475970 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
TRA2A-205ENST00000475970 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
TRA2A-205ENST00000475970 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
TRA2A-205ENST00000475970 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
TRA2A-205ENST00000475970 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
TRA2A-205ENST00000475970 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
TRA2A-205ENST00000475970 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
TRA2A-205ENST00000475970 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
TRA2A-205ENST00000475970 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
TRA2A-205ENST00000475970 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRA2A-205ENST00000475970 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
TRA2A-205ENST00000475970 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
TRA2A-205ENST00000475970 HAX1O00165 279 aa11.59□□□□□ -0.55
TRA2A-205ENST00000475970 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
TRA2A-205ENST00000475970 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRA2A-205ENST00000475970 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
TRA2A-205ENST00000475970 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
TRA2A-205ENST00000475970 FKBP8Q14318 412 aa11.42□□□□□ -0.58
TRA2A-205ENST00000475970 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
TRA2A-205ENST00000475970 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
TRA2A-205ENST00000475970 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
TRA2A-205ENST00000475970 EVX2Q03828 476 aa11.3□□□□□ -0.6
TRA2A-205ENST00000475970 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
TRA2A-205ENST00000475970 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
TRA2A-205ENST00000475970 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
TRA2A-205ENST00000475970 GABBR2O75899 941 aa11.13□□□□□ -0.63
TRA2A-205ENST00000475970 PROM2Q8N271 834 aa11.12□□□□□ -0.63
TRA2A-205ENST00000475970 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
TRA2A-205ENST00000475970 CLCN6P51797 869 aa11.06□□□□□ -0.64
TRA2A-205ENST00000475970 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
TRA2A-205ENST00000475970 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRA2A-205ENST00000475970 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
TRA2A-205ENST00000475970 ZNF579Q8NAF0 562 aaKnown RBP10.97□□□□□ -0.65
TRA2A-205ENST00000475970 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
TRA2A-205ENST00000475970 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
TRA2A-205ENST00000475970 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
TRA2A-205ENST00000475970 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
TRA2A-205ENST00000475970 LHX8Q68G74 356 aa10.85□□□□□ -0.67
TRA2A-205ENST00000475970 MIER1Q8N108 512 aa10.84□□□□□ -0.67
TRA2A-205ENST00000475970 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
TRA2A-205ENST00000475970 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
TRA2A-205ENST00000475970 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
TRA2A-205ENST00000475970 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
TRA2A-205ENST00000475970 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
TRA2A-205ENST00000475970 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms