RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
SDHB-204ENST00000475049 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
SDHB-204ENST00000475049 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
SDHB-204ENST00000475049 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
SDHB-204ENST00000475049 FOXD1Q16676 465 aa16.69■□□□□ 0.26
SDHB-204ENST00000475049 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
SDHB-204ENST00000475049 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
SDHB-204ENST00000475049 ADRA2BP18089 450 aa15.69■□□□□ 0.1
SDHB-204ENST00000475049 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
SDHB-204ENST00000475049 MSH5O43196 834 aa15.52■□□□□ 0.08
SDHB-204ENST00000475049 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
SDHB-204ENST00000475049 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
SDHB-204ENST00000475049 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
SDHB-204ENST00000475049 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
SDHB-204ENST00000475049 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
SDHB-204ENST00000475049 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
SDHB-204ENST00000475049 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
SDHB-204ENST00000475049 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
SDHB-204ENST00000475049 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
SDHB-204ENST00000475049 KCNA4P22459 653 aa13.67□□□□□ -0.22
SDHB-204ENST00000475049 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
SDHB-204ENST00000475049 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
SDHB-204ENST00000475049 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
SDHB-204ENST00000475049 RNF39Q9H2S5 420 aa13.28□□□□□ -0.28
SDHB-204ENST00000475049 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
SDHB-204ENST00000475049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.318e-6■□□□□ 8
SDHB-204ENST00000475049 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
SDHB-204ENST00000475049 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
SDHB-204ENST00000475049 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
SDHB-204ENST00000475049 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
SDHB-204ENST00000475049 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
SDHB-204ENST00000475049 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
SDHB-204ENST00000475049 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
SDHB-204ENST00000475049 CAPN15O75808 1086 aa12.57□□□□□ -0.4
SDHB-204ENST00000475049 ZBTB22O15209 634 aa12.55□□□□□ -0.4
SDHB-204ENST00000475049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
SDHB-204ENST00000475049 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
SDHB-204ENST00000475049 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
SDHB-204ENST00000475049 APLP2Q06481 763 aa12.5□□□□□ -0.41
SDHB-204ENST00000475049 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
SDHB-204ENST00000475049 DSG3P32926 999 aa12.49□□□□□ -0.41
SDHB-204ENST00000475049 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
SDHB-204ENST00000475049 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
SDHB-204ENST00000475049 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
SDHB-204ENST00000475049 ABCB7O75027 752 aa12.3□□□□□ -0.44
SDHB-204ENST00000475049 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
SDHB-204ENST00000475049 POLA2Q14181 598 aa12.14□□□□□ -0.47
SDHB-204ENST00000475049 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
SDHB-204ENST00000475049 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SDHB-204ENST00000475049 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
SDHB-204ENST00000475049 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
SDHB-204ENST00000475049 FBLN2P98095 1184 aa11.67□□□□□ -0.54
SDHB-204ENST00000475049 POTEHQ6S545 545 aa11.67□□□□□ -0.54
SDHB-204ENST00000475049 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
SDHB-204ENST00000475049 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
SDHB-204ENST00000475049 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
SDHB-204ENST00000475049 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
SDHB-204ENST00000475049 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
SDHB-204ENST00000475049 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
SDHB-204ENST00000475049 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
SDHB-204ENST00000475049 FKBP8Q14318 412 aa11.55□□□□□ -0.56
SDHB-204ENST00000475049 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
SDHB-204ENST00000475049 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
SDHB-204ENST00000475049 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
SDHB-204ENST00000475049 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
SDHB-204ENST00000475049 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
SDHB-204ENST00000475049 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
SDHB-204ENST00000475049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
SDHB-204ENST00000475049 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
SDHB-204ENST00000475049 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
SDHB-204ENST00000475049 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
SDHB-204ENST00000475049 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
SDHB-204ENST00000475049 HAX1O00165 279 aa11.06□□□□□ -0.64
SDHB-204ENST00000475049 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
SDHB-204ENST00000475049 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SDHB-204ENST00000475049 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
SDHB-204ENST00000475049 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
SDHB-204ENST00000475049 PROM2Q8N271 834 aa11□□□□□ -0.65
SDHB-204ENST00000475049 EVX2Q03828 476 aa10.99□□□□□ -0.65
SDHB-204ENST00000475049 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
SDHB-204ENST00000475049 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
SDHB-204ENST00000475049 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
SDHB-204ENST00000475049 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
SDHB-204ENST00000475049 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
SDHB-204ENST00000475049 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
SDHB-204ENST00000475049 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
SDHB-204ENST00000475049 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
SDHB-204ENST00000475049 GABBR2O75899 941 aa10.73□□□□□ -0.69
SDHB-204ENST00000475049 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
SDHB-204ENST00000475049 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
SDHB-204ENST00000475049 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
SDHB-204ENST00000475049 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
SDHB-204ENST00000475049 MIER1Q8N108 512 aa10.68□□□□□ -0.7
SDHB-204ENST00000475049 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
SDHB-204ENST00000475049 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
SDHB-204ENST00000475049 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
SDHB-204ENST00000475049 CLCN6P51797 869 aa10.62□□□□□ -0.71
SDHB-204ENST00000475049 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
SDHB-204ENST00000475049 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
SDHB-204ENST00000475049 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms