RNA–Protein interactions for RNA: ENST00000474932.1

GABRE-206, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 5

Gene GABRE, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-206ENST00000474932 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
GABRE-206ENST00000474932 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
GABRE-206ENST00000474932 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
GABRE-206ENST00000474932 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
GABRE-206ENST00000474932 FOXD1Q16676 465 aa15.1■□□□□ 0.01
GABRE-206ENST00000474932 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
GABRE-206ENST00000474932 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
GABRE-206ENST00000474932 ADRA2BP18089 450 aa14.22□□□□□ -0.13
GABRE-206ENST00000474932 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
GABRE-206ENST00000474932 MSH5O43196 834 aa14.11□□□□□ -0.15
GABRE-206ENST00000474932 POTEDQ86YR6 584 aa13.34□□□□□ -0.27
GABRE-206ENST00000474932 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
GABRE-206ENST00000474932 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
GABRE-206ENST00000474932 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
GABRE-206ENST00000474932 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
GABRE-206ENST00000474932 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
GABRE-206ENST00000474932 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
GABRE-206ENST00000474932 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
GABRE-206ENST00000474932 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
GABRE-206ENST00000474932 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
GABRE-206ENST00000474932 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
GABRE-206ENST00000474932 KCNA4P22459 653 aa12.28□□□□□ -0.44
GABRE-206ENST00000474932 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
GABRE-206ENST00000474932 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
GABRE-206ENST00000474932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.58e-13■■■■□ 26.7
GABRE-206ENST00000474932 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
GABRE-206ENST00000474932 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
GABRE-206ENST00000474932 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
GABRE-206ENST00000474932 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
GABRE-206ENST00000474932 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
GABRE-206ENST00000474932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
GABRE-206ENST00000474932 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
GABRE-206ENST00000474932 APLP2Q06481 763 aa11.49□□□□□ -0.57
GABRE-206ENST00000474932 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
GABRE-206ENST00000474932 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
GABRE-206ENST00000474932 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
GABRE-206ENST00000474932 CAPN15O75808 1086 aa11.43□□□□□ -0.58
GABRE-206ENST00000474932 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
GABRE-206ENST00000474932 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
GABRE-206ENST00000474932 DSG3P32926 999 aa11.33□□□□□ -0.6
GABRE-206ENST00000474932 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
GABRE-206ENST00000474932 ZBTB22O15209 634 aa11.28□□□□□ -0.6
GABRE-206ENST00000474932 ABCB7O75027 752 aa11.15□□□□□ -0.62
GABRE-206ENST00000474932 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
GABRE-206ENST00000474932 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
GABRE-206ENST00000474932 POLA2Q14181 598 aa11.06□□□□□ -0.64
GABRE-206ENST00000474932 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
GABRE-206ENST00000474932 EHMT2Q96KQ7 1210 aa10.93□□□□□ -0.66
GABRE-206ENST00000474932 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
GABRE-206ENST00000474932 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
GABRE-206ENST00000474932 FBLN2P98095 1184 aa10.72□□□□□ -0.69
GABRE-206ENST00000474932 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
GABRE-206ENST00000474932 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
GABRE-206ENST00000474932 MKRN4PQ13434 485 aaPredicted RBP10.61□□□□□ -0.71
GABRE-206ENST00000474932 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
GABRE-206ENST00000474932 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
GABRE-206ENST00000474932 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
GABRE-206ENST00000474932 POTEHQ6S545 545 aa10.51□□□□□ -0.73
GABRE-206ENST00000474932 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
GABRE-206ENST00000474932 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
GABRE-206ENST00000474932 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
GABRE-206ENST00000474932 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
GABRE-206ENST00000474932 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
GABRE-206ENST00000474932 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
GABRE-206ENST00000474932 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
GABRE-206ENST00000474932 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
GABRE-206ENST00000474932 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
GABRE-206ENST00000474932 CLEC11AQ9Y240 323 aa10.25□□□□□ -0.77
GABRE-206ENST00000474932 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
GABRE-206ENST00000474932 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
GABRE-206ENST00000474932 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
GABRE-206ENST00000474932 PRKAR2AP13861 404 aaKnown RBP10.11□□□□□ -0.79
GABRE-206ENST00000474932 PROM2Q8N271 834 aa10.07□□□□□ -0.8
GABRE-206ENST00000474932 HAX1O00165 279 aa10.02□□□□□ -0.81
GABRE-206ENST00000474932 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
GABRE-206ENST00000474932 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
GABRE-206ENST00000474932 FKBP8Q14318 412 aa9.94□□□□□ -0.82
GABRE-206ENST00000474932 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
GABRE-206ENST00000474932 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
GABRE-206ENST00000474932 C19orf67A6NJJ6 358 aa9.92□□□□□ -0.82
GABRE-206ENST00000474932 EVX2Q03828 476 aa9.87□□□□□ -0.83
GABRE-206ENST00000474932 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
GABRE-206ENST00000474932 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABRE-206ENST00000474932 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
GABRE-206ENST00000474932 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
GABRE-206ENST00000474932 CLCN6P51797 869 aa9.74□□□□□ -0.85
GABRE-206ENST00000474932 MIER1Q8N108 512 aa9.74□□□□□ -0.85
GABRE-206ENST00000474932 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
GABRE-206ENST00000474932 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
GABRE-206ENST00000474932 GABBR2O75899 941 aa9.7□□□□□ -0.86
GABRE-206ENST00000474932 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
GABRE-206ENST00000474932 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
GABRE-206ENST00000474932 ZRANB1Q9UGI0 708 aa9.7□□□□□ -0.86
GABRE-206ENST00000474932 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
GABRE-206ENST00000474932 VASPP50552 380 aaPredicted RBP9.57□□□□□ -0.88
GABRE-206ENST00000474932 PHF12Q96QT6 1004 aa9.56□□□□□ -0.88
GABRE-206ENST00000474932 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
GABRE-206ENST00000474932 RASEFQ8IZ41 740 aa9.55□□□□□ -0.88
GABRE-206ENST00000474932 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
GABRE-206ENST00000474932 NUBP1P53384 320 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms