RNA–Protein interactions for RNA: ENST00000474932.1

GABRE-206, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 5

Gene GABRE, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-206ENST00000474932 TIAL1Q01085 375 aaKnown RBP eCLIP3.42□□□□□ -1.863e-27■■■■■ 45.5
GABRE-206ENST00000474932 FMR1Q06787 632 aaKnown RBP eCLIP5.41□□□□□ -1.541e-24■■■■■ 85.5
GABRE-206ENST00000474932 SRSF1Q07955 248 aaKnown RBP eCLIP3.41□□□□□ -1.865e-17■■■■□ 20.6
GABRE-206ENST00000474932 SF3B4Q15427 424 aaKnown RBP eCLIP2.91□□□□□ -1.947e-16■■■□□ 17.9
GABRE-206ENST00000474932 U2AF1Q01081 240 aaKnown RBP eCLIP3.43□□□□□ -1.862e-14■□□□□ 11.3
GABRE-206ENST00000474932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.58e-13■■■■□ 26.7
GABRE-206ENST00000474932 TIA1P31483 386 aaKnown RBP eCLIP2.13□□□□□ -2.071e-12■■■■□ 21.9
GABRE-206ENST00000474932 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.41□□□□□ -2.022e-11■□□□□ 10.8
GABRE-206ENST00000474932 RBM22Q9NW64 420 aaKnown RBP eCLIP2.35□□□□□ -2.033e-11■■■■■ 61.7
GABRE-206ENST00000474932 PUM1Q14671 1186 aaKnown RBP eCLIP4.47□□□□□ -1.699e-11■■□□□ 12
GABRE-206ENST00000474932 U2AF2P26368 475 aaKnown RBP eCLIP2.81□□□□□ -1.969e-11■■■■■ 26.8
GABRE-206ENST00000474932 AQRO60306 1485 aaKnown RBP eCLIP4.89□□□□□ -1.635e-10■■■□□ 18.6
GABRE-206ENST00000474932 ZNF622Q969S3 477 aaKnown RBP eCLIP3.52□□□□□ -1.851e-9■■□□□ 14.5
GABRE-206ENST00000474932 CSTF2P33240 577 aaKnown RBP eCLIP2.49□□□□□ -2.012e-9■■■■■ 33.5
GABRE-206ENST00000474932 SF3A3Q12874 501 aaKnown RBP eCLIP3.05□□□□□ -1.924e-9■■■□□ 15.8
GABRE-206ENST00000474932 ZRANB2O95218 330 aaKnown RBP eCLIP3.64□□□□□ -1.834e-9■■■■□ 22.5
GABRE-206ENST00000474932 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.24□□□□□ -2.053e-8■■■□□ 18.6
GABRE-206ENST00000474932 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.03□□□□□ -1.61e-7■■■■■ 27.6
GABRE-206ENST00000474932 PPIGQ13427 754 aaKnown RBP eCLIP3.06□□□□□ -1.922e-7■□□□□ 10.8
GABRE-206ENST00000474932 PTBP1P26599 531 aaKnown RBP eCLIP1.85□□□□□ -2.112e-7■■□□□ 12.5
GABRE-206ENST00000474932 EFTUD2Q15029 972 aaKnown RBP eCLIP2.27□□□□□ -2.055e-7■□□□□ 8.5
GABRE-206ENST00000474932 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■□ 21.8
GABRE-206ENST00000474932 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.61□□□□□ -1.672e-6■■□□□ 12.9
GABRE-206ENST00000474932 MATR3P43243 847 aaKnown RBP eCLIP2.65□□□□□ -1.993e-6■□□□□ 9.6
GABRE-206ENST00000474932 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.733e-6■■■■□ 20
Retrieved 25 of 25 RNA–protein pairs in 15 ms