RNA–Protein interactions for RNA: ENST00000474132.1

ITSN1-226, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 628 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-226ENST00000474132 AEBP2Q6ZN18 517 aaPredicted RBP32.35■■■□□ 2.77
ITSN1-226ENST00000474132 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
ITSN1-226ENST00000474132 PHF23Q9BUL5 403 aaPredicted RBP27.81■■■□□ 2.04
ITSN1-226ENST00000474132 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
ITSN1-226ENST00000474132 PLPPR3Q6T4P5 718 aa25.71■■□□□ 1.71
ITSN1-226ENST00000474132 FOXD1Q16676 465 aa25.5■■□□□ 1.67
ITSN1-226ENST00000474132 ADRA2BP18089 450 aa24.54■■□□□ 1.52
ITSN1-226ENST00000474132 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
ITSN1-226ENST00000474132 PIAS4Q8N2W9 510 aaPredicted RBP24.08■■□□□ 1.45
ITSN1-226ENST00000474132 MSH5O43196 834 aa23.54■■□□□ 1.36
ITSN1-226ENST00000474132 PPP4R3CPQ6ZMV5 832 aa22.66■■□□□ 1.22
ITSN1-226ENST00000474132 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
ITSN1-226ENST00000474132 MAPK8IP2Q13387 824 aaPredicted RBP22.27■■□□□ 1.16
ITSN1-226ENST00000474132 KCNA4P22459 653 aa22.12■■□□□ 1.13
ITSN1-226ENST00000474132 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
ITSN1-226ENST00000474132 CNKSR2Q8WXI2 1034 aa22.02■■□□□ 1.12
ITSN1-226ENST00000474132 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
ITSN1-226ENST00000474132 NPM3O75607 178 aaKnown RBP21.73■■□□□ 1.07
ITSN1-226ENST00000474132 RNF216Q9NWF9 866 aaPredicted RBP21.58■■□□□ 1.05
ITSN1-226ENST00000474132 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
ITSN1-226ENST00000474132 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
ITSN1-226ENST00000474132 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
ITSN1-226ENST00000474132 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
ITSN1-226ENST00000474132 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
ITSN1-226ENST00000474132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.883e-6■■■■□ 25.1
ITSN1-226ENST00000474132 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
ITSN1-226ENST00000474132 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
ITSN1-226ENST00000474132 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
ITSN1-226ENST00000474132 ZBTB22O15209 634 aa20.33■□□□□ 0.85
ITSN1-226ENST00000474132 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
ITSN1-226ENST00000474132 RNF39Q9H2S5 420 aa20.15■□□□□ 0.82
ITSN1-226ENST00000474132 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
ITSN1-226ENST00000474132 MYCNP04198 464 aaPredicted RBP20.09■□□□□ 0.81
ITSN1-226ENST00000474132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
ITSN1-226ENST00000474132 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
ITSN1-226ENST00000474132 C1QBPQ07021 282 aaKnown RBP19.93■□□□□ 0.78
ITSN1-226ENST00000474132 SAMD1Q6SPF0 538 aaPredicted RBP19.85■□□□□ 0.77
ITSN1-226ENST00000474132 APLP2Q06481 763 aa19.74■□□□□ 0.75
ITSN1-226ENST00000474132 ATXN8OSP0DMR3 200 aa19.67■□□□□ 0.74
ITSN1-226ENST00000474132 CACNB1Q02641 598 aaPredicted RBP19.67■□□□□ 0.74
ITSN1-226ENST00000474132 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-226ENST00000474132 CAPN15O75808 1086 aa19.55■□□□□ 0.72
ITSN1-226ENST00000474132 ATF5Q9Y2D1 282 aaPredicted RBP19.53■□□□□ 0.72
ITSN1-226ENST00000474132 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
ITSN1-226ENST00000474132 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
ITSN1-226ENST00000474132 DSG3P32926 999 aa19.18■□□□□ 0.66
ITSN1-226ENST00000474132 ABCB7O75027 752 aa19.16■□□□□ 0.66
ITSN1-226ENST00000474132 POLA2Q14181 598 aa19.14■□□□□ 0.65
ITSN1-226ENST00000474132 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-226ENST00000474132 FBLN2P98095 1184 aa18.76■□□□□ 0.59
ITSN1-226ENST00000474132 MKRN4PQ13434 485 aaPredicted RBP18.67■□□□□ 0.58
ITSN1-226ENST00000474132 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
ITSN1-226ENST00000474132 FKBP8Q14318 412 aa18.32■□□□□ 0.52
ITSN1-226ENST00000474132 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
ITSN1-226ENST00000474132 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
ITSN1-226ENST00000474132 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
ITSN1-226ENST00000474132 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
ITSN1-226ENST00000474132 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
ITSN1-226ENST00000474132 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-226ENST00000474132 SSUH2Q9Y2M2 353 aa18.13■□□□□ 0.49
ITSN1-226ENST00000474132 AKT1S1Q96B36 256 aa18.08■□□□□ 0.48
ITSN1-226ENST00000474132 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
ITSN1-226ENST00000474132 PROM2Q8N271 834 aa17.93■□□□□ 0.46
ITSN1-226ENST00000474132 REM2Q8IYK8 340 aaPredicted RBP17.9■□□□□ 0.46
ITSN1-226ENST00000474132 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
ITSN1-226ENST00000474132 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
ITSN1-226ENST00000474132 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
ITSN1-226ENST00000474132 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
ITSN1-226ENST00000474132 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
ITSN1-226ENST00000474132 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
ITSN1-226ENST00000474132 CHRDL2Q6WN34 429 aa17.53■□□□□ 0.4
ITSN1-226ENST00000474132 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
ITSN1-226ENST00000474132 MIER1Q8N108 512 aa17.4■□□□□ 0.38
ITSN1-226ENST00000474132 PLCD3Q8N3E9 789 aa17.37■□□□□ 0.37
ITSN1-226ENST00000474132 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
ITSN1-226ENST00000474132 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
ITSN1-226ENST00000474132 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
ITSN1-226ENST00000474132 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
ITSN1-226ENST00000474132 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
ITSN1-226ENST00000474132 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
ITSN1-226ENST00000474132 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
ITSN1-226ENST00000474132 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
ITSN1-226ENST00000474132 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
ITSN1-226ENST00000474132 FARP1Q9Y4F1 1045 aaPredicted RBP17.1■□□□□ 0.33
ITSN1-226ENST00000474132 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
ITSN1-226ENST00000474132 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
ITSN1-226ENST00000474132 SPOCK2Q92563 424 aa17■□□□□ 0.31
ITSN1-226ENST00000474132 POTEHQ6S545 545 aa16.97■□□□□ 0.31
ITSN1-226ENST00000474132 NUBP1P53384 320 aa16.89■□□□□ 0.29
ITSN1-226ENST00000474132 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
ITSN1-226ENST00000474132 HAX1O00165 279 aa16.79■□□□□ 0.28
ITSN1-226ENST00000474132 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
ITSN1-226ENST00000474132 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
ITSN1-226ENST00000474132 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
ITSN1-226ENST00000474132 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
ITSN1-226ENST00000474132 PAK3O75914 559 aaPredicted RBP16.76■□□□□ 0.27
ITSN1-226ENST00000474132 CD44P16070 742 aaKnown RBP16.76■□□□□ 0.27
ITSN1-226ENST00000474132 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
ITSN1-226ENST00000474132 GSE1Q14687 1217 aa16.74■□□□□ 0.27
ITSN1-226ENST00000474132 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms