RNA–Protein interactions for RNA: ENST00000474051.1

RAD51B-206, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 786 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-206ENST00000474051 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
RAD51B-206ENST00000474051 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
RAD51B-206ENST00000474051 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
RAD51B-206ENST00000474051 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
RAD51B-206ENST00000474051 FOXD1Q16676 465 aa23.34■■□□□ 1.33
RAD51B-206ENST00000474051 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
RAD51B-206ENST00000474051 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
RAD51B-206ENST00000474051 ADRA2BP18089 450 aa21.91■■□□□ 1.1
RAD51B-206ENST00000474051 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
RAD51B-206ENST00000474051 MSH5O43196 834 aa21.68■■□□□ 1.06
RAD51B-206ENST00000474051 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
RAD51B-206ENST00000474051 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
RAD51B-206ENST00000474051 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
RAD51B-206ENST00000474051 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
RAD51B-206ENST00000474051 PPP4R3CPQ6ZMV5 832 aa19.74■□□□□ 0.75
RAD51B-206ENST00000474051 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
RAD51B-206ENST00000474051 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
RAD51B-206ENST00000474051 RNF216Q9NWF9 866 aaPredicted RBP19.09■□□□□ 0.65
RAD51B-206ENST00000474051 DCAF8L1A6NGE4 600 aa19.04■□□□□ 0.64
RAD51B-206ENST00000474051 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
RAD51B-206ENST00000474051 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
RAD51B-206ENST00000474051 KCNA4P22459 653 aa18.59■□□□□ 0.57
RAD51B-206ENST00000474051 RNF39Q9H2S5 420 aa18.57■□□□□ 0.56
RAD51B-206ENST00000474051 CACNB1Q02641 598 aaPredicted RBP18.53■□□□□ 0.56
RAD51B-206ENST00000474051 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
RAD51B-206ENST00000474051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.527e-7■□□□□ 9.1
RAD51B-206ENST00000474051 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
RAD51B-206ENST00000474051 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
RAD51B-206ENST00000474051 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
RAD51B-206ENST00000474051 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
RAD51B-206ENST00000474051 CAPN15O75808 1086 aa17.57■□□□□ 0.4
RAD51B-206ENST00000474051 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
RAD51B-206ENST00000474051 DSG3P32926 999 aa17.47■□□□□ 0.39
RAD51B-206ENST00000474051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
RAD51B-206ENST00000474051 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
RAD51B-206ENST00000474051 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
RAD51B-206ENST00000474051 APLP2Q06481 763 aa17.32■□□□□ 0.36
RAD51B-206ENST00000474051 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
RAD51B-206ENST00000474051 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
RAD51B-206ENST00000474051 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
RAD51B-206ENST00000474051 ABCB7O75027 752 aa17.23■□□□□ 0.35
RAD51B-206ENST00000474051 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
RAD51B-206ENST00000474051 ZBTB22O15209 634 aa17.13■□□□□ 0.33
RAD51B-206ENST00000474051 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
RAD51B-206ENST00000474051 POLA2Q14181 598 aa16.92■□□□□ 0.3
RAD51B-206ENST00000474051 ATXN8OSP0DMR3 200 aa16.64■□□□□ 0.25
RAD51B-206ENST00000474051 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
RAD51B-206ENST00000474051 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
RAD51B-206ENST00000474051 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
RAD51B-206ENST00000474051 POTEHQ6S545 545 aa16.44■□□□□ 0.22
RAD51B-206ENST00000474051 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
RAD51B-206ENST00000474051 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
RAD51B-206ENST00000474051 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
RAD51B-206ENST00000474051 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
RAD51B-206ENST00000474051 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
RAD51B-206ENST00000474051 FBLN2P98095 1184 aa16.19■□□□□ 0.18
RAD51B-206ENST00000474051 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
RAD51B-206ENST00000474051 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
RAD51B-206ENST00000474051 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
RAD51B-206ENST00000474051 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
RAD51B-206ENST00000474051 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
RAD51B-206ENST00000474051 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
RAD51B-206ENST00000474051 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
RAD51B-206ENST00000474051 PIP4P2Q8N4L2 257 aa15.88■□□□□ 0.13
RAD51B-206ENST00000474051 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
RAD51B-206ENST00000474051 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
RAD51B-206ENST00000474051 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
RAD51B-206ENST00000474051 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
RAD51B-206ENST00000474051 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
RAD51B-206ENST00000474051 HAX1O00165 279 aa15.52■□□□□ 0.08
RAD51B-206ENST00000474051 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
RAD51B-206ENST00000474051 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
RAD51B-206ENST00000474051 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
RAD51B-206ENST00000474051 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
RAD51B-206ENST00000474051 EVX2Q03828 476 aa15.43■□□□□ 0.06
RAD51B-206ENST00000474051 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
RAD51B-206ENST00000474051 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
RAD51B-206ENST00000474051 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
RAD51B-206ENST00000474051 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
RAD51B-206ENST00000474051 PROM2Q8N271 834 aa15.13■□□□□ 0.01
RAD51B-206ENST00000474051 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
RAD51B-206ENST00000474051 GABBR2O75899 941 aa15.03■□□□□ -0
RAD51B-206ENST00000474051 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
RAD51B-206ENST00000474051 FKBP8Q14318 412 aa14.9□□□□□ -0.02
RAD51B-206ENST00000474051 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
RAD51B-206ENST00000474051 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
RAD51B-206ENST00000474051 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
RAD51B-206ENST00000474051 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
RAD51B-206ENST00000474051 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
RAD51B-206ENST00000474051 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
RAD51B-206ENST00000474051 CLCN6P51797 869 aa14.72□□□□□ -0.05
RAD51B-206ENST00000474051 MIER1Q8N108 512 aa14.71□□□□□ -0.05
RAD51B-206ENST00000474051 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
RAD51B-206ENST00000474051 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
RAD51B-206ENST00000474051 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
RAD51B-206ENST00000474051 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
RAD51B-206ENST00000474051 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
RAD51B-206ENST00000474051 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
RAD51B-206ENST00000474051 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
RAD51B-206ENST00000474051 LHX8Q68G74 356 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms