RNA–Protein interactions for RNA: ENST00000473473.1

BCL3-206, Transcript of B cell CLL/lymphoma 3, humanhuman

TSL 2

Gene BCL3, Length 445 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3-206ENST00000473473 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
BCL3-206ENST00000473473 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
BCL3-206ENST00000473473 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
BCL3-206ENST00000473473 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
BCL3-206ENST00000473473 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
BCL3-206ENST00000473473 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
BCL3-206ENST00000473473 ADRA2BP18089 450 aa15.06■□□□□ 0
BCL3-206ENST00000473473 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
BCL3-206ENST00000473473 FOXD1Q16676 465 aa14.85□□□□□ -0.03
BCL3-206ENST00000473473 KCNA4P22459 653 aa14.81□□□□□ -0.04
BCL3-206ENST00000473473 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
BCL3-206ENST00000473473 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
BCL3-206ENST00000473473 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
BCL3-206ENST00000473473 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
BCL3-206ENST00000473473 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
BCL3-206ENST00000473473 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
BCL3-206ENST00000473473 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
BCL3-206ENST00000473473 ABCC9O60706 1549 aa13.96□□□□□ -0.17
BCL3-206ENST00000473473 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
BCL3-206ENST00000473473 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
BCL3-206ENST00000473473 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
BCL3-206ENST00000473473 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
BCL3-206ENST00000473473 NACADO15069 1562 aa13.78□□□□□ -0.2
BCL3-206ENST00000473473 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
BCL3-206ENST00000473473 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.21
BCL3-206ENST00000473473 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
BCL3-206ENST00000473473 ZBTB22O15209 634 aa13.65□□□□□ -0.22
BCL3-206ENST00000473473 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
BCL3-206ENST00000473473 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
BCL3-206ENST00000473473 MSH5O43196 834 aa13.4□□□□□ -0.26
BCL3-206ENST00000473473 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
BCL3-206ENST00000473473 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
BCL3-206ENST00000473473 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
BCL3-206ENST00000473473 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
BCL3-206ENST00000473473 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
BCL3-206ENST00000473473 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
BCL3-206ENST00000473473 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
BCL3-206ENST00000473473 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
BCL3-206ENST00000473473 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
BCL3-206ENST00000473473 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
BCL3-206ENST00000473473 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
BCL3-206ENST00000473473 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
BCL3-206ENST00000473473 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
BCL3-206ENST00000473473 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
BCL3-206ENST00000473473 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
BCL3-206ENST00000473473 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
BCL3-206ENST00000473473 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
BCL3-206ENST00000473473 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
BCL3-206ENST00000473473 FKBP8Q14318 412 aa12.79□□□□□ -0.36
BCL3-206ENST00000473473 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
BCL3-206ENST00000473473 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
BCL3-206ENST00000473473 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
BCL3-206ENST00000473473 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
BCL3-206ENST00000473473 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
BCL3-206ENST00000473473 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
BCL3-206ENST00000473473 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
BCL3-206ENST00000473473 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
BCL3-206ENST00000473473 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
BCL3-206ENST00000473473 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
BCL3-206ENST00000473473 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
BCL3-206ENST00000473473 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
BCL3-206ENST00000473473 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
BCL3-206ENST00000473473 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
BCL3-206ENST00000473473 WIZO95785 1651 aa12.42□□□□□ -0.42
BCL3-206ENST00000473473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
BCL3-206ENST00000473473 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
BCL3-206ENST00000473473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
BCL3-206ENST00000473473 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
BCL3-206ENST00000473473 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
BCL3-206ENST00000473473 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
BCL3-206ENST00000473473 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
BCL3-206ENST00000473473 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
BCL3-206ENST00000473473 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
BCL3-206ENST00000473473 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
BCL3-206ENST00000473473 CFTRP13569 1480 aa12.27□□□□□ -0.44
BCL3-206ENST00000473473 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
BCL3-206ENST00000473473 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
BCL3-206ENST00000473473 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
BCL3-206ENST00000473473 FANCD2Q9BXW9 1451 aa12.13□□□□□ -0.47
BCL3-206ENST00000473473 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
BCL3-206ENST00000473473 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
BCL3-206ENST00000473473 APLP2Q06481 763 aa12.08□□□□□ -0.48
BCL3-206ENST00000473473 NESP48681 1621 aa12.06□□□□□ -0.48
BCL3-206ENST00000473473 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
BCL3-206ENST00000473473 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
BCL3-206ENST00000473473 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
BCL3-206ENST00000473473 CUX2O14529 1486 aa12.03□□□□□ -0.48
BCL3-206ENST00000473473 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
BCL3-206ENST00000473473 PLCB2Q00722 1185 aa11.96□□□□□ -0.49
BCL3-206ENST00000473473 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
BCL3-206ENST00000473473 WDR62O43379 1518 aa11.96□□□□□ -0.5
BCL3-206ENST00000473473 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
BCL3-206ENST00000473473 PROM2Q8N271 834 aa11.95□□□□□ -0.5
BCL3-206ENST00000473473 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
BCL3-206ENST00000473473 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
BCL3-206ENST00000473473 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
BCL3-206ENST00000473473 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
BCL3-206ENST00000473473 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
BCL3-206ENST00000473473 FBLN2P98095 1184 aa11.89□□□□□ -0.51
BCL3-206ENST00000473473 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms