RNA–Protein interactions for RNA: ENST00000472706.5

USP34-211, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-211ENST00000472706 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.67□□□□□ -1.669e-13■■■■■ 72.1
USP34-211ENST00000472706 PTBP1P26599 531 aaKnown RBP eCLIP4.95□□□□□ -1.622e-8■■■■■ 71.7
USP34-211ENST00000472706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.98□□□□□ -1.939e-7■■■■■ 56.3
USP34-211ENST00000472706 SF3B1O75533 1304 aaKnown RBP eCLIP5.24□□□□□ -1.572e-6■■■■■ 55.1
USP34-211ENST00000472706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.69□□□□□ -1.51e-6■■■■■ 53.5
USP34-211ENST00000472706 ZC3H11AO75152 810 aaKnown RBP eCLIP5.18□□□□□ -1.582e-10■■■■■ 52.1
USP34-211ENST00000472706 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.656e-9■■■■■ 47.5
USP34-211ENST00000472706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.64□□□□□ -1.517e-10■■■■■ 43.6
USP34-211ENST00000472706 EFTUD2Q15029 972 aaKnown RBP eCLIP5.17□□□□□ -1.583e-7■■■■■ 41.1
USP34-211ENST00000472706 TARDBPQ13148 414 aaKnown RBP eCLIP5.12□□□□□ -1.593e-23■■■■■ 40.3
USP34-211ENST00000472706 LARP4Q71RC2 724 aaKnown RBP eCLIP4.94□□□□□ -1.627e-7■■■■■ 35.5
USP34-211ENST00000472706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.19□□□□□ -1.583e-7■■■■■ 34.2
USP34-211ENST00000472706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.573e-6■■■■■ 32.3
USP34-211ENST00000472706 AARSP49588 968 aaKnown RBP eCLIP5.79□□□□□ -1.484e-6■■■■■ 30.6
USP34-211ENST00000472706 QKIQ96PU8 341 aaKnown RBP eCLIP4.97□□□□□ -1.612e-7■■■■■ 28.2
USP34-211ENST00000472706 SF3B4Q15427 424 aaKnown RBP eCLIP5.16□□□□□ -1.583e-7■■■■■ 27.4
USP34-211ENST00000472706 FMR1Q06787 632 aaKnown RBP eCLIP5.52□□□□□ -1.538e-10■■■■■ 27
USP34-211ENST00000472706 U2AF1Q01081 240 aaKnown RBP eCLIP5.83□□□□□ -1.483e-7■■■■■ 27
USP34-211ENST00000472706 CSTF2P33240 577 aaKnown RBP eCLIP5.12□□□□□ -1.598e-8■■■■□ 25
USP34-211ENST00000472706 AQRO60306 1485 aaKnown RBP eCLIP6.44□□□□□ -1.381e-7■■■■□ 24.7
USP34-211ENST00000472706 HNRNPCP07910 306 aaKnown RBP eCLIP5.44□□□□□ -1.541e-7■■■■□ 24.2
USP34-211ENST00000472706 SF3A3Q12874 501 aaKnown RBP eCLIP5.29□□□□□ -1.561e-7■■■■□ 23.3
USP34-211ENST00000472706 ZRANB2O95218 330 aaKnown RBP eCLIP5.92□□□□□ -1.461e-9■■■■□ 23
USP34-211ENST00000472706 FXR2P51116 673 aaKnown RBP eCLIP6.81□□□□□ -1.321e-6■■■■□ 23
USP34-211ENST00000472706 PCBP2Q15366 365 aaKnown RBP eCLIP4.78□□□□□ -1.645e-12■■■■□ 22.9
USP34-211ENST00000472706 ILF3Q12906 894 aaKnown RBP eCLIP4.78□□□□□ -1.645e-6■■■■□ 20.7
USP34-211ENST00000472706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.55□□□□□ -1.362e-10■■■□□ 19.1
USP34-211ENST00000472706 YBX3P16989 372 aaKnown RBP eCLIP5.17□□□□□ -1.589e-6■■■□□ 18.6
USP34-211ENST00000472706 DKC1O60832 514 aaKnown RBP eCLIP5.31□□□□□ -1.561e-10■■■□□ 18.6
USP34-211ENST00000472706 ZNF622Q969S3 477 aaKnown RBP eCLIP6.15□□□□□ -1.429e-7■■■□□ 18.1
USP34-211ENST00000472706 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.38□□□□□ -1.557e-7■■■□□ 17.9
USP34-211ENST00000472706 GPKOWQ92917 476 aaPredicted RBP eCLIP5.59□□□□□ -1.511e-7■■■□□ 17.6
USP34-211ENST00000472706 FXR1P51114 621 aaKnown RBP eCLIP5.53□□□□□ -1.526e-6■■■□□ 17.1
USP34-211ENST00000472706 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.363e-7■■■□□ 17
USP34-211ENST00000472706 IGF2BP3O00425 579 aaKnown RBP eCLIP5.48□□□□□ -1.533e-10■■■□□ 16.6
USP34-211ENST00000472706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5□□□□□ -1.611e-6■■■□□ 16.3
USP34-211ENST00000472706 KHSRPQ92945 711 aaKnown RBP eCLIP5.99□□□□□ -1.454e-7■■■□□ 15.8
USP34-211ENST00000472706 EIF3HO15372 352 aaKnown RBP eCLIP5.73□□□□□ -1.497e-7■■■□□ 15.4
USP34-211ENST00000472706 PPIGQ13427 754 aaKnown RBP eCLIP4.79□□□□□ -1.645e-7■■■□□ 14.8
USP34-211ENST00000472706 U2AF2P26368 475 aaKnown RBP eCLIP6.09□□□□□ -1.434e-7■■□□□ 14.4
USP34-211ENST00000472706 TRA2AQ13595 282 aaKnown RBP eCLIP4.47□□□□□ -1.696e-8■■□□□ 14.4
USP34-211ENST00000472706 MATR3P43243 847 aaKnown RBP eCLIP5.46□□□□□ -1.542e-12■■□□□ 13.7
USP34-211ENST00000472706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■□□□ 13.2
USP34-211ENST00000472706 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.519e-8■■□□□ 13.1
USP34-211ENST00000472706 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.635e-10■■□□□ 12.8
USP34-211ENST00000472706 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.544e-7■■□□□ 12
USP34-211ENST00000472706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.9□□□□□ -1.467e-7■■□□□ 11.5
USP34-211ENST00000472706 EIF3DO15371 548 aaKnown RBP eCLIP5.18□□□□□ -1.585e-7■■□□□ 11.4
USP34-211ENST00000472706 HLTFQ14527 1009 aaKnown RBP eCLIP5.47□□□□□ -1.532e-6■□□□□ 11
USP34-211ENST00000472706 SRSF1Q07955 248 aaKnown RBP eCLIP4.17□□□□□ -1.743e-6■□□□□ 10.7
USP34-211ENST00000472706 TIAL1Q01085 375 aaKnown RBP eCLIP4.72□□□□□ -1.652e-6■□□□□ 10.4
USP34-211ENST00000472706 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.84□□□□□ -1.475e-6■□□□□ 10.3
USP34-211ENST00000472706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.9□□□□□ -1.466e-7■□□□□ 9.9
USP34-211ENST00000472706 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.06□□□□□ -1.61e-6■□□□□ 8.4
Retrieved 54 of 54 RNA–protein pairs in 13.2 ms