RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
LINC02339-201ENST00000472649 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
LINC02339-201ENST00000472649 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
LINC02339-201ENST00000472649 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
LINC02339-201ENST00000472649 FOXD1Q16676 465 aa22.89■■□□□ 1.25
LINC02339-201ENST00000472649 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
LINC02339-201ENST00000472649 MSH5O43196 834 aa21.75■■□□□ 1.07
LINC02339-201ENST00000472649 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
LINC02339-201ENST00000472649 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
LINC02339-201ENST00000472649 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
LINC02339-201ENST00000472649 ADRA2BP18089 450 aa20.81■□□□□ 0.92
LINC02339-201ENST00000472649 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
LINC02339-201ENST00000472649 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
LINC02339-201ENST00000472649 MAPK8IP2Q13387 824 aaPredicted RBP19.25■□□□□ 0.67
LINC02339-201ENST00000472649 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
LINC02339-201ENST00000472649 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
LINC02339-201ENST00000472649 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
LINC02339-201ENST00000472649 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
LINC02339-201ENST00000472649 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
LINC02339-201ENST00000472649 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
LINC02339-201ENST00000472649 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
LINC02339-201ENST00000472649 RNF216Q9NWF9 866 aaPredicted RBP18.26■□□□□ 0.51
LINC02339-201ENST00000472649 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
LINC02339-201ENST00000472649 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
LINC02339-201ENST00000472649 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
LINC02339-201ENST00000472649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC02339-201ENST00000472649 KCNA4P22459 653 aa17.53■□□□□ 0.4
LINC02339-201ENST00000472649 POTEHQ6S545 545 aa17.45■□□□□ 0.38
LINC02339-201ENST00000472649 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
LINC02339-201ENST00000472649 DSG3P32926 999 aa17.05■□□□□ 0.32
LINC02339-201ENST00000472649 CAPN15O75808 1086 aa16.94■□□□□ 0.3
LINC02339-201ENST00000472649 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
LINC02339-201ENST00000472649 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
LINC02339-201ENST00000472649 APLP2Q06481 763 aa16.9■□□□□ 0.3
LINC02339-201ENST00000472649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
LINC02339-201ENST00000472649 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
LINC02339-201ENST00000472649 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
LINC02339-201ENST00000472649 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
LINC02339-201ENST00000472649 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
LINC02339-201ENST00000472649 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
LINC02339-201ENST00000472649 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
LINC02339-201ENST00000472649 ABCB7O75027 752 aa16.44■□□□□ 0.22
LINC02339-201ENST00000472649 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
LINC02339-201ENST00000472649 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
LINC02339-201ENST00000472649 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
LINC02339-201ENST00000472649 POLA2Q14181 598 aa16.17■□□□□ 0.18
LINC02339-201ENST00000472649 ZBTB22O15209 634 aa16.03■□□□□ 0.16
LINC02339-201ENST00000472649 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
LINC02339-201ENST00000472649 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
LINC02339-201ENST00000472649 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
LINC02339-201ENST00000472649 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
LINC02339-201ENST00000472649 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
LINC02339-201ENST00000472649 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
LINC02339-201ENST00000472649 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
LINC02339-201ENST00000472649 FBLN2P98095 1184 aa15.63■□□□□ 0.09
LINC02339-201ENST00000472649 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
LINC02339-201ENST00000472649 HAX1O00165 279 aa15.59■□□□□ 0.09
LINC02339-201ENST00000472649 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC02339-201ENST00000472649 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
LINC02339-201ENST00000472649 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
LINC02339-201ENST00000472649 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
LINC02339-201ENST00000472649 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
LINC02339-201ENST00000472649 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
LINC02339-201ENST00000472649 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
LINC02339-201ENST00000472649 EVX2Q03828 476 aa15.32■□□□□ 0.04
LINC02339-201ENST00000472649 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
LINC02339-201ENST00000472649 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
LINC02339-201ENST00000472649 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
LINC02339-201ENST00000472649 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
LINC02339-201ENST00000472649 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
LINC02339-201ENST00000472649 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
LINC02339-201ENST00000472649 LHX8Q68G74 356 aa15.02■□□□□ -0
LINC02339-201ENST00000472649 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
LINC02339-201ENST00000472649 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
LINC02339-201ENST00000472649 GABBR2O75899 941 aa14.97□□□□□ -0.01
LINC02339-201ENST00000472649 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
LINC02339-201ENST00000472649 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
LINC02339-201ENST00000472649 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
LINC02339-201ENST00000472649 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
LINC02339-201ENST00000472649 PLSCR2Q9NRY7 297 aa14.64□□□□□ -0.07
LINC02339-201ENST00000472649 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
LINC02339-201ENST00000472649 CLCN6P51797 869 aa14.59□□□□□ -0.07
LINC02339-201ENST00000472649 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
LINC02339-201ENST00000472649 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
LINC02339-201ENST00000472649 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
LINC02339-201ENST00000472649 DCBLD2Q96PD2 775 aa14.41□□□□□ -0.1
LINC02339-201ENST00000472649 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC02339-201ENST00000472649 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.12
LINC02339-201ENST00000472649 PROM2Q8N271 834 aa14.3□□□□□ -0.12
LINC02339-201ENST00000472649 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
LINC02339-201ENST00000472649 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
LINC02339-201ENST00000472649 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
LINC02339-201ENST00000472649 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
LINC02339-201ENST00000472649 POTEMA6NI47 508 aa14.15□□□□□ -0.14
LINC02339-201ENST00000472649 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
LINC02339-201ENST00000472649 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
LINC02339-201ENST00000472649 MIER1Q8N108 512 aa14.11□□□□□ -0.15
LINC02339-201ENST00000472649 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
LINC02339-201ENST00000472649 FKBP8Q14318 412 aa14.1□□□□□ -0.15
LINC02339-201ENST00000472649 POTEGQ6S5H5 508 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms