RNA–Protein interactions for RNA: ENST00000472494.1

HOTTIP-202, HOXA distal transcript antisense RNA, humanhuman

TSL 2 BASIC

Gene HOTTIP, Length 2,285 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTTIP-202ENST00000472494 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
HOTTIP-202ENST00000472494 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
HOTTIP-202ENST00000472494 ZCCHC6Q5VYS8 1495 aaKnown RBP33.42■■■□□ 2.94
HOTTIP-202ENST00000472494 SHROOM4Q9ULL8 1493 aa32.89■■■□□ 2.86
HOTTIP-202ENST00000472494 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
HOTTIP-202ENST00000472494 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
HOTTIP-202ENST00000472494 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
HOTTIP-202ENST00000472494 ABCC9O60706 1549 aa31.99■■■□□ 2.71
HOTTIP-202ENST00000472494 SUPT5HO00267 1087 aaKnown RBP31.91■■■□□ 2.7
HOTTIP-202ENST00000472494 NACADO15069 1562 aa31.74■■■□□ 2.67
HOTTIP-202ENST00000472494 SCRIBQ14160 1630 aa31.66■■■□□ 2.66
HOTTIP-202ENST00000472494 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
HOTTIP-202ENST00000472494 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
HOTTIP-202ENST00000472494 CECR2Q9BXF3 1484 aa30.86■■■□□ 2.53
HOTTIP-202ENST00000472494 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
HOTTIP-202ENST00000472494 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
HOTTIP-202ENST00000472494 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
HOTTIP-202ENST00000472494 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
HOTTIP-202ENST00000472494 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
HOTTIP-202ENST00000472494 WIZO95785 1651 aa30.48■■■□□ 2.47
HOTTIP-202ENST00000472494 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
HOTTIP-202ENST00000472494 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
HOTTIP-202ENST00000472494 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
HOTTIP-202ENST00000472494 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
HOTTIP-202ENST00000472494 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
HOTTIP-202ENST00000472494 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.37
HOTTIP-202ENST00000472494 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
HOTTIP-202ENST00000472494 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
HOTTIP-202ENST00000472494 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
HOTTIP-202ENST00000472494 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
HOTTIP-202ENST00000472494 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
HOTTIP-202ENST00000472494 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
HOTTIP-202ENST00000472494 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
HOTTIP-202ENST00000472494 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
HOTTIP-202ENST00000472494 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
HOTTIP-202ENST00000472494 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
HOTTIP-202ENST00000472494 EHMT2Q96KQ7 1210 aa29.07■■■□□ 2.24
HOTTIP-202ENST00000472494 SOGA1O94964 1423 aa29.06■■■□□ 2.24
HOTTIP-202ENST00000472494 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
HOTTIP-202ENST00000472494 EEA1Q15075 1411 aa28.95■■■□□ 2.23
HOTTIP-202ENST00000472494 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.23
HOTTIP-202ENST00000472494 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
HOTTIP-202ENST00000472494 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
HOTTIP-202ENST00000472494 CFTRP13569 1480 aa28.88■■■□□ 2.21
HOTTIP-202ENST00000472494 CSRNP3Q8WYN3 585 aa28.86■■■□□ 2.21
HOTTIP-202ENST00000472494 TOP2BQ02880 1626 aa28.82■■■□□ 2.2
HOTTIP-202ENST00000472494 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
HOTTIP-202ENST00000472494 TRIM26Q12899 539 aaPredicted RBP28.72■■■□□ 2.19
HOTTIP-202ENST00000472494 TNIKQ9UKE5 1360 aa28.68■■■□□ 2.18
HOTTIP-202ENST00000472494 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
HOTTIP-202ENST00000472494 CUX1P39880 1505 aa28.66■■■□□ 2.18
HOTTIP-202ENST00000472494 PRDM2Q13029 1718 aa28.64■■■□□ 2.18
HOTTIP-202ENST00000472494 GOLGA3Q08378 1498 aa28.63■■■□□ 2.17
HOTTIP-202ENST00000472494 CEP162Q5TB80 1403 aa28.59■■■□□ 2.17
HOTTIP-202ENST00000472494 KIF21BO75037 1637 aa28.57■■■□□ 2.16
HOTTIP-202ENST00000472494 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
HOTTIP-202ENST00000472494 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
HOTTIP-202ENST00000472494 HRCP23327 699 aa28.54■■■□□ 2.16
HOTTIP-202ENST00000472494 RAPGEF2Q9Y4G8 1499 aa28.41■■■□□ 2.14
HOTTIP-202ENST00000472494 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
HOTTIP-202ENST00000472494 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
HOTTIP-202ENST00000472494 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
HOTTIP-202ENST00000472494 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
HOTTIP-202ENST00000472494 NESP48681 1621 aa28.31■■■□□ 2.12
HOTTIP-202ENST00000472494 ERICH3Q5RHP9 1530 aa28.27■■■□□ 2.12
HOTTIP-202ENST00000472494 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
HOTTIP-202ENST00000472494 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
HOTTIP-202ENST00000472494 CLIP1P30622 1438 aa28.23■■■□□ 2.11
HOTTIP-202ENST00000472494 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
HOTTIP-202ENST00000472494 CUX2O14529 1486 aa28.17■■■□□ 2.1
HOTTIP-202ENST00000472494 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
HOTTIP-202ENST00000472494 IGF1RP08069 1367 aa28.11■■■□□ 2.09
HOTTIP-202ENST00000472494 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
HOTTIP-202ENST00000472494 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
HOTTIP-202ENST00000472494 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
HOTTIP-202ENST00000472494 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
HOTTIP-202ENST00000472494 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
HOTTIP-202ENST00000472494 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
HOTTIP-202ENST00000472494 RANGAP1P46060 587 aaPredicted RBP27.99■■■□□ 2.07
HOTTIP-202ENST00000472494 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
HOTTIP-202ENST00000472494 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
HOTTIP-202ENST00000472494 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
HOTTIP-202ENST00000472494 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
HOTTIP-202ENST00000472494 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
HOTTIP-202ENST00000472494 WDR97A6NE52 1622 aa27.8■■■□□ 2.04
HOTTIP-202ENST00000472494 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
HOTTIP-202ENST00000472494 ZEB1P37275 1124 aaPredicted RBP27.79■■■□□ 2.04
HOTTIP-202ENST00000472494 APLP2Q06481 763 aa27.75■■■□□ 2.03
HOTTIP-202ENST00000472494 CUL7Q14999 1698 aa27.7■■■□□ 2.02
HOTTIP-202ENST00000472494 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
HOTTIP-202ENST00000472494 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
HOTTIP-202ENST00000472494 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.01
HOTTIP-202ENST00000472494 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
HOTTIP-202ENST00000472494 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
HOTTIP-202ENST00000472494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
HOTTIP-202ENST00000472494 KANK4Q5T7N3 995 aaPredicted RBP27.55■■■□□ 2
HOTTIP-202ENST00000472494 CCER1Q8TC90 406 aaPredicted RBP27.5■■□□□ 1.99
HOTTIP-202ENST00000472494 CTTNBP2Q8WZ74 1663 aa27.48■■□□□ 1.99
HOTTIP-202ENST00000472494 WDR62O43379 1518 aa27.45■■□□□ 1.98
HOTTIP-202ENST00000472494 EFCAB5A4FU69 1503 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms