RNA–Protein interactions for RNA: ENST00000472385.1

MACF1-214, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-214ENST00000472385 AEBP2Q6ZN18 517 aaPredicted RBP35.82■■■■□ 3.32
MACF1-214ENST00000472385 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
MACF1-214ENST00000472385 SENP3Q9H4L4 574 aaPredicted RBP30.7■■■□□ 2.51
MACF1-214ENST00000472385 PHF23Q9BUL5 403 aaPredicted RBP30.19■■■□□ 2.42
MACF1-214ENST00000472385 FOXD1Q16676 465 aa28.68■■■□□ 2.18
MACF1-214ENST00000472385 POTEDQ86YR6 584 aa27.65■■■□□ 2.02
MACF1-214ENST00000472385 MSH5O43196 834 aa27.13■■□□□ 1.93
MACF1-214ENST00000472385 PIAS4Q8N2W9 510 aaPredicted RBP26.64■■□□□ 1.86
MACF1-214ENST00000472385 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
MACF1-214ENST00000472385 PPP6R1Q9UPN7 881 aa26.27■■□□□ 1.8
MACF1-214ENST00000472385 ADRA2BP18089 450 aa26.16■■□□□ 1.78
MACF1-214ENST00000472385 MAPK8IP2Q13387 824 aaPredicted RBP24.23■■□□□ 1.47
MACF1-214ENST00000472385 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
MACF1-214ENST00000472385 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
MACF1-214ENST00000472385 CACNB1Q02641 598 aaPredicted RBP23.71■■□□□ 1.39
MACF1-214ENST00000472385 DCAF8L1A6NGE4 600 aa23.29■■□□□ 1.32
MACF1-214ENST00000472385 PPP4R3CPQ6ZMV5 832 aa23.13■■□□□ 1.29
MACF1-214ENST00000472385 RNF39Q9H2S5 420 aa23.07■■□□□ 1.28
MACF1-214ENST00000472385 HOXD11P31277 338 aaPredicted RBP23.06■■□□□ 1.28
MACF1-214ENST00000472385 CNKSR2Q8WXI2 1034 aa22.83■■□□□ 1.25
MACF1-214ENST00000472385 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
MACF1-214ENST00000472385 C1QBPQ07021 282 aaKnown RBP22.71■■□□□ 1.23
MACF1-214ENST00000472385 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
MACF1-214ENST00000472385 NCBP3Q53F19 620 aaKnown RBP22.16■■□□□ 1.14
MACF1-214ENST00000472385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.123e-7■■■■□ 23.3
MACF1-214ENST00000472385 NPM3O75607 178 aaKnown RBP21.75■■□□□ 1.07
MACF1-214ENST00000472385 POTEHQ6S545 545 aa21.54■■□□□ 1.04
MACF1-214ENST00000472385 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
MACF1-214ENST00000472385 DSG3P32926 999 aa21.37■■□□□ 1.01
MACF1-214ENST00000472385 CAPN15O75808 1086 aa21.36■■□□□ 1.01
MACF1-214ENST00000472385 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
MACF1-214ENST00000472385 APLP2Q06481 763 aa20.91■□□□□ 0.94
MACF1-214ENST00000472385 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
MACF1-214ENST00000472385 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
MACF1-214ENST00000472385 KCNA4P22459 653 aa20.86■□□□□ 0.93
MACF1-214ENST00000472385 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
MACF1-214ENST00000472385 ABCB7O75027 752 aa20.79■□□□□ 0.92
MACF1-214ENST00000472385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
MACF1-214ENST00000472385 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
MACF1-214ENST00000472385 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.89
MACF1-214ENST00000472385 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
MACF1-214ENST00000472385 CHRDL2Q6WN34 429 aa20.25■□□□□ 0.83
MACF1-214ENST00000472385 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
MACF1-214ENST00000472385 POLA2Q14181 598 aa20.17■□□□□ 0.82
MACF1-214ENST00000472385 SP7Q8TDD2 431 aaPredicted RBP19.86■□□□□ 0.77
MACF1-214ENST00000472385 AKT1S1Q96B36 256 aa19.8■□□□□ 0.76
MACF1-214ENST00000472385 ZBTB12Q9Y330 459 aaPredicted RBP19.77■□□□□ 0.76
MACF1-214ENST00000472385 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
MACF1-214ENST00000472385 ATF5Q9Y2D1 282 aaPredicted RBP19.67■□□□□ 0.74
MACF1-214ENST00000472385 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
MACF1-214ENST00000472385 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
MACF1-214ENST00000472385 PIP4P2Q8N4L2 257 aa19.61■□□□□ 0.73
MACF1-214ENST00000472385 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
MACF1-214ENST00000472385 HAX1O00165 279 aa19.46■□□□□ 0.71
MACF1-214ENST00000472385 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
MACF1-214ENST00000472385 FXR2P51116 673 aaKnown RBP eCLIP19.38■□□□□ 0.699e-7■■■■□ 24.1
MACF1-214ENST00000472385 EVX2Q03828 476 aa19.14■□□□□ 0.65
MACF1-214ENST00000472385 ZBTB22O15209 634 aa19.13■□□□□ 0.65
MACF1-214ENST00000472385 ATXN8OSP0DMR3 200 aa19.11■□□□□ 0.65
MACF1-214ENST00000472385 SPDYE2BA6NHP3 402 aa19.08■□□□□ 0.64
MACF1-214ENST00000472385 SPDYE6P0CI01 402 aa19.08■□□□□ 0.64
MACF1-214ENST00000472385 SPDYE2Q495Y8 402 aa19.08■□□□□ 0.64
MACF1-214ENST00000472385 FBLN2P98095 1184 aa19.07■□□□□ 0.64
MACF1-214ENST00000472385 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
MACF1-214ENST00000472385 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
MACF1-214ENST00000472385 SPDYE1Q8NFV5 336 aaPredicted RBP18.9■□□□□ 0.62
MACF1-214ENST00000472385 C19orf67A6NJJ6 358 aa18.79■□□□□ 0.6
MACF1-214ENST00000472385 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
MACF1-214ENST00000472385 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
MACF1-214ENST00000472385 SSUH2Q9Y2M2 353 aa18.72■□□□□ 0.59
MACF1-214ENST00000472385 GABBR2O75899 941 aa18.69■□□□□ 0.58
MACF1-214ENST00000472385 LHX8Q68G74 356 aa18.62■□□□□ 0.57
MACF1-214ENST00000472385 CHADLQ6NUI6 762 aa18.55■□□□□ 0.56
MACF1-214ENST00000472385 PRR29P0C7W0 189 aa18.51■□□□□ 0.55
MACF1-214ENST00000472385 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
MACF1-214ENST00000472385 CD44P16070 742 aaKnown RBP18.28■□□□□ 0.52
MACF1-214ENST00000472385 POTEIP0CG38 1075 aa18.27■□□□□ 0.52
MACF1-214ENST00000472385 FARP1Q9Y4F1 1045 aaPredicted RBP18.23■□□□□ 0.51
MACF1-214ENST00000472385 CLCN6P51797 869 aa18.17■□□□□ 0.5
MACF1-214ENST00000472385 DCBLD2Q96PD2 775 aa18.05■□□□□ 0.48
MACF1-214ENST00000472385 PLSCR2Q9NRY7 297 aa18.02■□□□□ 0.48
MACF1-214ENST00000472385 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
MACF1-214ENST00000472385 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
MACF1-214ENST00000472385 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
MACF1-214ENST00000472385 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
MACF1-214ENST00000472385 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
MACF1-214ENST00000472385 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
MACF1-214ENST00000472385 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
MACF1-214ENST00000472385 OTUD5Q96G74 571 aa17.74■□□□□ 0.43
MACF1-214ENST00000472385 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
MACF1-214ENST00000472385 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
MACF1-214ENST00000472385 PHF12Q96QT6 1004 aa17.62■□□□□ 0.41
MACF1-214ENST00000472385 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
MACF1-214ENST00000472385 POTEMA6NI47 508 aa17.57■□□□□ 0.4
MACF1-214ENST00000472385 POTEGQ6S5H5 508 aa17.5■□□□□ 0.39
MACF1-214ENST00000472385 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
MACF1-214ENST00000472385 MNX1P50219 401 aaPredicted RBP17.45■□□□□ 0.38
MACF1-214ENST00000472385 METRNQ9UJH8 293 aa17.37■□□□□ 0.37
MACF1-214ENST00000472385 ASTLQ6HA08 431 aaPredicted RBP17.36■□□□□ 0.37
MACF1-214ENST00000472385 MS4A3Q96HJ5 214 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms