RNA–Protein interactions for RNA: ENST00000472383.1

GFM1-204, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 3

Gene GFM1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-204ENST00000472383 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
GFM1-204ENST00000472383 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
GFM1-204ENST00000472383 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
GFM1-204ENST00000472383 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
GFM1-204ENST00000472383 FOXD1Q16676 465 aa24.04■■□□□ 1.44
GFM1-204ENST00000472383 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
GFM1-204ENST00000472383 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
GFM1-204ENST00000472383 MSH5O43196 834 aa22.7■■□□□ 1.22
GFM1-204ENST00000472383 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
GFM1-204ENST00000472383 ADRA2BP18089 450 aa22.48■■□□□ 1.19
GFM1-204ENST00000472383 PIAS4Q8N2W9 510 aaPredicted RBP22.37■■□□□ 1.17
GFM1-204ENST00000472383 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
GFM1-204ENST00000472383 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
GFM1-204ENST00000472383 PPP4R3CPQ6ZMV5 832 aa20.37■□□□□ 0.85
GFM1-204ENST00000472383 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
GFM1-204ENST00000472383 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
GFM1-204ENST00000472383 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
GFM1-204ENST00000472383 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
GFM1-204ENST00000472383 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
GFM1-204ENST00000472383 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
GFM1-204ENST00000472383 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
GFM1-204ENST00000472383 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
GFM1-204ENST00000472383 KCNA4P22459 653 aa19.42■□□□□ 0.7
GFM1-204ENST00000472383 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
GFM1-204ENST00000472383 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
GFM1-204ENST00000472383 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
GFM1-204ENST00000472383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.59
GFM1-204ENST00000472383 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
GFM1-204ENST00000472383 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
GFM1-204ENST00000472383 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
GFM1-204ENST00000472383 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
GFM1-204ENST00000472383 CAPN15O75808 1086 aa17.98■□□□□ 0.47
GFM1-204ENST00000472383 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
GFM1-204ENST00000472383 DSG3P32926 999 aa17.93■□□□□ 0.46
GFM1-204ENST00000472383 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
GFM1-204ENST00000472383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
GFM1-204ENST00000472383 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
GFM1-204ENST00000472383 ZBTB22O15209 634 aa17.9■□□□□ 0.46
GFM1-204ENST00000472383 POTEHQ6S545 545 aa17.88■□□□□ 0.45
GFM1-204ENST00000472383 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
GFM1-204ENST00000472383 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
GFM1-204ENST00000472383 APLP2Q06481 763 aa17.8■□□□□ 0.44
GFM1-204ENST00000472383 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
GFM1-204ENST00000472383 ABCB7O75027 752 aa17.65■□□□□ 0.42
GFM1-204ENST00000472383 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
GFM1-204ENST00000472383 POLA2Q14181 598 aa17.39■□□□□ 0.37
GFM1-204ENST00000472383 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
GFM1-204ENST00000472383 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
GFM1-204ENST00000472383 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
GFM1-204ENST00000472383 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
GFM1-204ENST00000472383 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
GFM1-204ENST00000472383 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
GFM1-204ENST00000472383 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
GFM1-204ENST00000472383 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
GFM1-204ENST00000472383 FBLN2P98095 1184 aa16.75■□□□□ 0.27
GFM1-204ENST00000472383 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
GFM1-204ENST00000472383 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
GFM1-204ENST00000472383 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
GFM1-204ENST00000472383 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
GFM1-204ENST00000472383 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
GFM1-204ENST00000472383 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
GFM1-204ENST00000472383 PIP4P2Q8N4L2 257 aa16.43■□□□□ 0.22
GFM1-204ENST00000472383 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
GFM1-204ENST00000472383 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
GFM1-204ENST00000472383 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
GFM1-204ENST00000472383 HAX1O00165 279 aa16.29■□□□□ 0.2
GFM1-204ENST00000472383 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
GFM1-204ENST00000472383 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
GFM1-204ENST00000472383 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
GFM1-204ENST00000472383 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
GFM1-204ENST00000472383 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
GFM1-204ENST00000472383 EVX2Q03828 476 aa16■□□□□ 0.15
GFM1-204ENST00000472383 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
GFM1-204ENST00000472383 PRKAR2AP13861 404 aaKnown RBP15.9■□□□□ 0.14
GFM1-204ENST00000472383 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
GFM1-204ENST00000472383 PROM2Q8N271 834 aa15.78■□□□□ 0.12
GFM1-204ENST00000472383 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
GFM1-204ENST00000472383 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
GFM1-204ENST00000472383 FKBP8Q14318 412 aa15.72■□□□□ 0.11
GFM1-204ENST00000472383 GABBR2O75899 941 aa15.65■□□□□ 0.1
GFM1-204ENST00000472383 CREBZFQ9NS37 354 aa15.64■□□□□ 0.09
GFM1-204ENST00000472383 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
GFM1-204ENST00000472383 LHX8Q68G74 356 aa15.52■□□□□ 0.08
GFM1-204ENST00000472383 CD44P16070 742 aaKnown RBP15.42■□□□□ 0.06
GFM1-204ENST00000472383 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
GFM1-204ENST00000472383 MIER1Q8N108 512 aa15.31■□□□□ 0.04
GFM1-204ENST00000472383 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
GFM1-204ENST00000472383 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
GFM1-204ENST00000472383 CLCN6P51797 869 aa15.26■□□□□ 0.03
GFM1-204ENST00000472383 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
GFM1-204ENST00000472383 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
GFM1-204ENST00000472383 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
GFM1-204ENST00000472383 ZNF579Q8NAF0 562 aaKnown RBP15.18■□□□□ 0.02
GFM1-204ENST00000472383 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
GFM1-204ENST00000472383 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
GFM1-204ENST00000472383 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
GFM1-204ENST00000472383 PHF12Q96QT6 1004 aa15.12■□□□□ 0.01
GFM1-204ENST00000472383 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
GFM1-204ENST00000472383 RASEFQ8IZ41 740 aa15.08■□□□□ 0
GFM1-204ENST00000472383 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms