RNA–Protein interactions for RNA: ENST00000472202.1

ATP5C1-207, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

TSL 2

Gene ATP5C1, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-207ENST00000472202 AEBP2Q6ZN18 517 aaPredicted RBP30.66■■■□□ 2.5
ATP5C1-207ENST00000472202 CHIC1Q5VXU3 224 aa29.9■■■□□ 2.38
ATP5C1-207ENST00000472202 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
ATP5C1-207ENST00000472202 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
ATP5C1-207ENST00000472202 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
ATP5C1-207ENST00000472202 FOXD1Q16676 465 aa24.14■■□□□ 1.45
ATP5C1-207ENST00000472202 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
ATP5C1-207ENST00000472202 ADRA2BP18089 450 aa23.21■■□□□ 1.31
ATP5C1-207ENST00000472202 PIAS4Q8N2W9 510 aaPredicted RBP22.74■■□□□ 1.23
ATP5C1-207ENST00000472202 MSH5O43196 834 aa22.24■■□□□ 1.15
ATP5C1-207ENST00000472202 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
ATP5C1-207ENST00000472202 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
ATP5C1-207ENST00000472202 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
ATP5C1-207ENST00000472202 KCNA4P22459 653 aa20.88■□□□□ 0.93
ATP5C1-207ENST00000472202 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
ATP5C1-207ENST00000472202 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
ATP5C1-207ENST00000472202 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
ATP5C1-207ENST00000472202 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.88
ATP5C1-207ENST00000472202 RNF216Q9NWF9 866 aaPredicted RBP20.39■□□□□ 0.85
ATP5C1-207ENST00000472202 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
ATP5C1-207ENST00000472202 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
ATP5C1-207ENST00000472202 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
ATP5C1-207ENST00000472202 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
ATP5C1-207ENST00000472202 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
ATP5C1-207ENST00000472202 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
ATP5C1-207ENST00000472202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.691e-10■□□□□ 10.9
ATP5C1-207ENST00000472202 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
ATP5C1-207ENST00000472202 ZBTB22O15209 634 aa19.22■□□□□ 0.67
ATP5C1-207ENST00000472202 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
ATP5C1-207ENST00000472202 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
ATP5C1-207ENST00000472202 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
ATP5C1-207ENST00000472202 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
ATP5C1-207ENST00000472202 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
ATP5C1-207ENST00000472202 C1QBPQ07021 282 aaKnown RBP18.84■□□□□ 0.61
ATP5C1-207ENST00000472202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
ATP5C1-207ENST00000472202 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
ATP5C1-207ENST00000472202 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
ATP5C1-207ENST00000472202 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
ATP5C1-207ENST00000472202 APLP2Q06481 763 aa18.58■□□□□ 0.56
ATP5C1-207ENST00000472202 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
ATP5C1-207ENST00000472202 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
ATP5C1-207ENST00000472202 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
ATP5C1-207ENST00000472202 CAPN15O75808 1086 aa18.44■□□□□ 0.54
ATP5C1-207ENST00000472202 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
ATP5C1-207ENST00000472202 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
ATP5C1-207ENST00000472202 DSG3P32926 999 aa18.15■□□□□ 0.5
ATP5C1-207ENST00000472202 ABCB7O75027 752 aa18.09■□□□□ 0.49
ATP5C1-207ENST00000472202 POLA2Q14181 598 aa18.06■□□□□ 0.48
ATP5C1-207ENST00000472202 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
ATP5C1-207ENST00000472202 FBLN2P98095 1184 aa17.67■□□□□ 0.42
ATP5C1-207ENST00000472202 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
ATP5C1-207ENST00000472202 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
ATP5C1-207ENST00000472202 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
ATP5C1-207ENST00000472202 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
ATP5C1-207ENST00000472202 SPDYE2Q495Y8 402 aa17.27■□□□□ 0.36
ATP5C1-207ENST00000472202 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
ATP5C1-207ENST00000472202 FKBP8Q14318 412 aa17.25■□□□□ 0.35
ATP5C1-207ENST00000472202 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
ATP5C1-207ENST00000472202 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
ATP5C1-207ENST00000472202 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
ATP5C1-207ENST00000472202 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
ATP5C1-207ENST00000472202 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
ATP5C1-207ENST00000472202 PROM2Q8N271 834 aa16.97■□□□□ 0.31
ATP5C1-207ENST00000472202 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
ATP5C1-207ENST00000472202 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
ATP5C1-207ENST00000472202 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
ATP5C1-207ENST00000472202 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
ATP5C1-207ENST00000472202 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
ATP5C1-207ENST00000472202 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
ATP5C1-207ENST00000472202 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
ATP5C1-207ENST00000472202 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
ATP5C1-207ENST00000472202 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATP5C1-207ENST00000472202 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
ATP5C1-207ENST00000472202 PIP4P2Q8N4L2 257 aa16.37■□□□□ 0.21
ATP5C1-207ENST00000472202 MIER1Q8N108 512 aa16.36■□□□□ 0.21
ATP5C1-207ENST00000472202 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
ATP5C1-207ENST00000472202 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
ATP5C1-207ENST00000472202 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
ATP5C1-207ENST00000472202 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
ATP5C1-207ENST00000472202 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
ATP5C1-207ENST00000472202 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
ATP5C1-207ENST00000472202 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
ATP5C1-207ENST00000472202 KLHL34Q8N239 644 aa16.14■□□□□ 0.17
ATP5C1-207ENST00000472202 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
ATP5C1-207ENST00000472202 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
ATP5C1-207ENST00000472202 POTEHQ6S545 545 aa16.07■□□□□ 0.16
ATP5C1-207ENST00000472202 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATP5C1-207ENST00000472202 SPOCK2Q92563 424 aa16■□□□□ 0.15
ATP5C1-207ENST00000472202 NUBP1P53384 320 aa15.96■□□□□ 0.15
ATP5C1-207ENST00000472202 RASEFQ8IZ41 740 aa15.89■□□□□ 0.13
ATP5C1-207ENST00000472202 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
ATP5C1-207ENST00000472202 HAX1O00165 279 aa15.84■□□□□ 0.13
ATP5C1-207ENST00000472202 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
ATP5C1-207ENST00000472202 FAM212AQ96EL1 285 aa15.8■□□□□ 0.12
ATP5C1-207ENST00000472202 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
ATP5C1-207ENST00000472202 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
ATP5C1-207ENST00000472202 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
ATP5C1-207ENST00000472202 GSE1Q14687 1217 aa15.75■□□□□ 0.11
ATP5C1-207ENST00000472202 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
ATP5C1-207ENST00000472202 EVX2Q03828 476 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms