RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
UBXN11-213ENST00000472155 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
UBXN11-213ENST00000472155 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
UBXN11-213ENST00000472155 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
UBXN11-213ENST00000472155 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
UBXN11-213ENST00000472155 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
UBXN11-213ENST00000472155 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
UBXN11-213ENST00000472155 ABCC9O60706 1549 aa25.89■■□□□ 1.74
UBXN11-213ENST00000472155 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
UBXN11-213ENST00000472155 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
UBXN11-213ENST00000472155 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
UBXN11-213ENST00000472155 NACADO15069 1562 aa25.46■■□□□ 1.67
UBXN11-213ENST00000472155 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
UBXN11-213ENST00000472155 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
UBXN11-213ENST00000472155 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
UBXN11-213ENST00000472155 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
UBXN11-213ENST00000472155 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
UBXN11-213ENST00000472155 WIZO95785 1651 aa24.94■■□□□ 1.58
UBXN11-213ENST00000472155 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
UBXN11-213ENST00000472155 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.559e-7■■■□□ 16.4
UBXN11-213ENST00000472155 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
UBXN11-213ENST00000472155 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
UBXN11-213ENST00000472155 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
UBXN11-213ENST00000472155 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
UBXN11-213ENST00000472155 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.53
UBXN11-213ENST00000472155 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
UBXN11-213ENST00000472155 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
UBXN11-213ENST00000472155 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
UBXN11-213ENST00000472155 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
UBXN11-213ENST00000472155 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
UBXN11-213ENST00000472155 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
UBXN11-213ENST00000472155 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
UBXN11-213ENST00000472155 HRCP23327 699 aa24.22■■□□□ 1.47
UBXN11-213ENST00000472155 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
UBXN11-213ENST00000472155 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
UBXN11-213ENST00000472155 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
UBXN11-213ENST00000472155 SOGA1O94964 1423 aa23.98■■□□□ 1.43
UBXN11-213ENST00000472155 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
UBXN11-213ENST00000472155 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
UBXN11-213ENST00000472155 RUSC2Q8N2Y8 1516 aa23.93■■□□□ 1.42
UBXN11-213ENST00000472155 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
UBXN11-213ENST00000472155 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
UBXN11-213ENST00000472155 CSRNP3Q8WYN3 585 aa23.73■■□□□ 1.39
UBXN11-213ENST00000472155 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
UBXN11-213ENST00000472155 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
UBXN11-213ENST00000472155 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
UBXN11-213ENST00000472155 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
UBXN11-213ENST00000472155 EEA1Q15075 1411 aa23.58■■□□□ 1.36
UBXN11-213ENST00000472155 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
UBXN11-213ENST00000472155 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
UBXN11-213ENST00000472155 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
UBXN11-213ENST00000472155 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
UBXN11-213ENST00000472155 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.34
UBXN11-213ENST00000472155 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.33
UBXN11-213ENST00000472155 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
UBXN11-213ENST00000472155 CUX1P39880 1505 aa23.35■■□□□ 1.33
UBXN11-213ENST00000472155 KIF21BO75037 1637 aa23.35■■□□□ 1.33
UBXN11-213ENST00000472155 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
UBXN11-213ENST00000472155 CFTRP13569 1480 aa23.34■■□□□ 1.33
UBXN11-213ENST00000472155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
UBXN11-213ENST00000472155 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
UBXN11-213ENST00000472155 CLIP1P30622 1438 aa23.25■■□□□ 1.31
UBXN11-213ENST00000472155 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
UBXN11-213ENST00000472155 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
UBXN11-213ENST00000472155 PRXQ9BXM0 1461 aa23.13■■□□□ 1.29
UBXN11-213ENST00000472155 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
UBXN11-213ENST00000472155 VPS8Q8N3P4 1428 aa23.08■■□□□ 1.29
UBXN11-213ENST00000472155 KIF27Q86VH2 1401 aa23.07■■□□□ 1.28
UBXN11-213ENST00000472155 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
UBXN11-213ENST00000472155 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
UBXN11-213ENST00000472155 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
UBXN11-213ENST00000472155 NESP48681 1621 aa23.01■■□□□ 1.27
UBXN11-213ENST00000472155 CUX2O14529 1486 aa22.99■■□□□ 1.27
UBXN11-213ENST00000472155 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
UBXN11-213ENST00000472155 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
UBXN11-213ENST00000472155 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.27
UBXN11-213ENST00000472155 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
UBXN11-213ENST00000472155 IGF1RP08069 1367 aa22.93■■□□□ 1.26
UBXN11-213ENST00000472155 APLP2Q06481 763 aa22.91■■□□□ 1.26
UBXN11-213ENST00000472155 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
UBXN11-213ENST00000472155 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
UBXN11-213ENST00000472155 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
UBXN11-213ENST00000472155 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
UBXN11-213ENST00000472155 TOPBP1Q92547 1522 aa22.77■■□□□ 1.23
UBXN11-213ENST00000472155 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
UBXN11-213ENST00000472155 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
UBXN11-213ENST00000472155 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
UBXN11-213ENST00000472155 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
UBXN11-213ENST00000472155 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.22
UBXN11-213ENST00000472155 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
UBXN11-213ENST00000472155 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
UBXN11-213ENST00000472155 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
UBXN11-213ENST00000472155 ITGAEP38570 1179 aa22.51■■□□□ 1.19
UBXN11-213ENST00000472155 ATP1B4Q9UN42 357 aaPredicted RBP22.5■■□□□ 1.19
UBXN11-213ENST00000472155 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
UBXN11-213ENST00000472155 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
UBXN11-213ENST00000472155 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
UBXN11-213ENST00000472155 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
UBXN11-213ENST00000472155 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
UBXN11-213ENST00000472155 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms