RNA–Protein interactions for RNA: ENST00000471692.1

CDC23-204, Transcript of cell division cycle 23, humanhuman

TSL 5

Gene CDC23, Length 1,104 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-204ENST00000471692 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
CDC23-204ENST00000471692 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
CDC23-204ENST00000471692 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
CDC23-204ENST00000471692 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
CDC23-204ENST00000471692 FOXD1Q16676 465 aa23.65■■□□□ 1.38
CDC23-204ENST00000471692 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
CDC23-204ENST00000471692 PPP6R1Q9UPN7 881 aa22.69■■□□□ 1.22
CDC23-204ENST00000471692 ADRA2BP18089 450 aa22.63■■□□□ 1.21
CDC23-204ENST00000471692 PIAS4Q8N2W9 510 aaPredicted RBP22.22■■□□□ 1.15
CDC23-204ENST00000471692 MSH5O43196 834 aa21.75■■□□□ 1.07
CDC23-204ENST00000471692 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
CDC23-204ENST00000471692 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
CDC23-204ENST00000471692 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
CDC23-204ENST00000471692 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
CDC23-204ENST00000471692 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
CDC23-204ENST00000471692 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
CDC23-204ENST00000471692 KCNA4P22459 653 aa20.12■□□□□ 0.81
CDC23-204ENST00000471692 NCBP3Q53F19 620 aaKnown RBP20.03■□□□□ 0.8
CDC23-204ENST00000471692 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
CDC23-204ENST00000471692 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
CDC23-204ENST00000471692 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
CDC23-204ENST00000471692 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
CDC23-204ENST00000471692 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
CDC23-204ENST00000471692 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
CDC23-204ENST00000471692 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
CDC23-204ENST00000471692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC23-204ENST00000471692 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
CDC23-204ENST00000471692 ZBTB22O15209 634 aa18.57■□□□□ 0.56
CDC23-204ENST00000471692 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
CDC23-204ENST00000471692 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
CDC23-204ENST00000471692 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
CDC23-204ENST00000471692 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
CDC23-204ENST00000471692 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
CDC23-204ENST00000471692 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
CDC23-204ENST00000471692 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
CDC23-204ENST00000471692 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
CDC23-204ENST00000471692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
CDC23-204ENST00000471692 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
CDC23-204ENST00000471692 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
CDC23-204ENST00000471692 CAPN15O75808 1086 aa17.96■□□□□ 0.47
CDC23-204ENST00000471692 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
CDC23-204ENST00000471692 APLP2Q06481 763 aa17.93■□□□□ 0.46
CDC23-204ENST00000471692 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
CDC23-204ENST00000471692 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
CDC23-204ENST00000471692 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
CDC23-204ENST00000471692 DSG3P32926 999 aa17.75■□□□□ 0.43
CDC23-204ENST00000471692 ABCB7O75027 752 aa17.68■□□□□ 0.42
CDC23-204ENST00000471692 POLA2Q14181 598 aa17.54■□□□□ 0.4
CDC23-204ENST00000471692 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
CDC23-204ENST00000471692 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
CDC23-204ENST00000471692 FBLN2P98095 1184 aa17.03■□□□□ 0.32
CDC23-204ENST00000471692 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
CDC23-204ENST00000471692 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
CDC23-204ENST00000471692 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
CDC23-204ENST00000471692 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
CDC23-204ENST00000471692 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
CDC23-204ENST00000471692 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
CDC23-204ENST00000471692 SSUH2Q9Y2M2 353 aa16.63■□□□□ 0.25
CDC23-204ENST00000471692 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
CDC23-204ENST00000471692 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
CDC23-204ENST00000471692 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
CDC23-204ENST00000471692 FKBP8Q14318 412 aa16.48■□□□□ 0.23
CDC23-204ENST00000471692 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDC23-204ENST00000471692 PROM2Q8N271 834 aa16.35■□□□□ 0.21
CDC23-204ENST00000471692 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
CDC23-204ENST00000471692 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
CDC23-204ENST00000471692 SPDYE1Q8NFV5 336 aaPredicted RBP16.25■□□□□ 0.19
CDC23-204ENST00000471692 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
CDC23-204ENST00000471692 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
CDC23-204ENST00000471692 FXR2P51116 673 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDC23-204ENST00000471692 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
CDC23-204ENST00000471692 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
CDC23-204ENST00000471692 POTEHQ6S545 545 aa15.93■□□□□ 0.14
CDC23-204ENST00000471692 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
CDC23-204ENST00000471692 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
CDC23-204ENST00000471692 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
CDC23-204ENST00000471692 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
CDC23-204ENST00000471692 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
CDC23-204ENST00000471692 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
CDC23-204ENST00000471692 MIER1Q8N108 512 aa15.71■□□□□ 0.11
CDC23-204ENST00000471692 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
CDC23-204ENST00000471692 PLCD3Q8N3E9 789 aa15.67■□□□□ 0.1
CDC23-204ENST00000471692 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
CDC23-204ENST00000471692 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
CDC23-204ENST00000471692 HAX1O00165 279 aa15.51■□□□□ 0.07
CDC23-204ENST00000471692 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
CDC23-204ENST00000471692 EVX2Q03828 476 aa15.5■□□□□ 0.07
CDC23-204ENST00000471692 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDC23-204ENST00000471692 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
CDC23-204ENST00000471692 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
CDC23-204ENST00000471692 CD44P16070 742 aaKnown RBP15.42■□□□□ 0.06
CDC23-204ENST00000471692 NUBP1P53384 320 aa15.41■□□□□ 0.06
CDC23-204ENST00000471692 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
CDC23-204ENST00000471692 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
CDC23-204ENST00000471692 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
CDC23-204ENST00000471692 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
CDC23-204ENST00000471692 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
CDC23-204ENST00000471692 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
CDC23-204ENST00000471692 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
CDC23-204ENST00000471692 CCDC61Q9Y6R9 512 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms