RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-208ENST00000470019 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
PTK7-208ENST00000470019 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
PTK7-208ENST00000470019 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.77
PTK7-208ENST00000470019 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
PTK7-208ENST00000470019 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
PTK7-208ENST00000470019 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
PTK7-208ENST00000470019 ABCC9O60706 1549 aa24.14■■□□□ 1.46
PTK7-208ENST00000470019 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
PTK7-208ENST00000470019 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
PTK7-208ENST00000470019 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
PTK7-208ENST00000470019 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
PTK7-208ENST00000470019 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
PTK7-208ENST00000470019 LOC105371045A0A1W2PR82 267 aa23.7■■□□□ 1.38
PTK7-208ENST00000470019 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.378e-8■■□□□ 13.3
PTK7-208ENST00000470019 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.36
PTK7-208ENST00000470019 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
PTK7-208ENST00000470019 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
PTK7-208ENST00000470019 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
PTK7-208ENST00000470019 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
PTK7-208ENST00000470019 APLP2Q06481 763 aa23.03■■□□□ 1.28
PTK7-208ENST00000470019 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
PTK7-208ENST00000470019 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
PTK7-208ENST00000470019 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.26
PTK7-208ENST00000470019 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
PTK7-208ENST00000470019 HRCP23327 699 aa22.78■■□□□ 1.24
PTK7-208ENST00000470019 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
PTK7-208ENST00000470019 CCER1Q8TC90 406 aaPredicted RBP22.76■■□□□ 1.23
PTK7-208ENST00000470019 NACADO15069 1562 aa22.74■■□□□ 1.23
PTK7-208ENST00000470019 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
PTK7-208ENST00000470019 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.23
PTK7-208ENST00000470019 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
PTK7-208ENST00000470019 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
PTK7-208ENST00000470019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
PTK7-208ENST00000470019 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
PTK7-208ENST00000470019 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
PTK7-208ENST00000470019 ITGAEP38570 1179 aa22.36■■□□□ 1.17
PTK7-208ENST00000470019 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
PTK7-208ENST00000470019 WIZO95785 1651 aa22.18■■□□□ 1.14
PTK7-208ENST00000470019 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
PTK7-208ENST00000470019 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
PTK7-208ENST00000470019 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
PTK7-208ENST00000470019 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
PTK7-208ENST00000470019 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.11
PTK7-208ENST00000470019 SOGA1O94964 1423 aa21.96■■□□□ 1.11
PTK7-208ENST00000470019 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
PTK7-208ENST00000470019 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
PTK7-208ENST00000470019 CEP162Q5TB80 1403 aa21.83■■□□□ 1.09
PTK7-208ENST00000470019 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
PTK7-208ENST00000470019 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
PTK7-208ENST00000470019 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
PTK7-208ENST00000470019 FBLN2P98095 1184 aa21.76■■□□□ 1.07
PTK7-208ENST00000470019 CLIP1P30622 1438 aa21.74■■□□□ 1.07
PTK7-208ENST00000470019 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
PTK7-208ENST00000470019 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.06
PTK7-208ENST00000470019 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PTK7-208ENST00000470019 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
PTK7-208ENST00000470019 EEA1Q15075 1411 aa21.67■■□□□ 1.06
PTK7-208ENST00000470019 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
PTK7-208ENST00000470019 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
PTK7-208ENST00000470019 NEUROD1Q13562 356 aa21.61■■□□□ 1.05
PTK7-208ENST00000470019 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
PTK7-208ENST00000470019 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
PTK7-208ENST00000470019 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
PTK7-208ENST00000470019 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
PTK7-208ENST00000470019 CUX2O14529 1486 aa21.4■■□□□ 1.02
PTK7-208ENST00000470019 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
PTK7-208ENST00000470019 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
PTK7-208ENST00000470019 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
PTK7-208ENST00000470019 POLR3GLQ9BT43 218 aa21.33■■□□□ 1.01
PTK7-208ENST00000470019 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1
PTK7-208ENST00000470019 KANK4Q5T7N3 995 aaPredicted RBP21.31■■□□□ 1
PTK7-208ENST00000470019 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
PTK7-208ENST00000470019 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
PTK7-208ENST00000470019 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
PTK7-208ENST00000470019 CHIC2Q9UKJ5 165 aa21.27■■□□□ 1
PTK7-208ENST00000470019 ZNF777Q9ULD5 760 aaPredicted RBP21.27■■□□□ 1
PTK7-208ENST00000470019 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
PTK7-208ENST00000470019 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
PTK7-208ENST00000470019 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
PTK7-208ENST00000470019 MTUS2Q5JR59 1369 aa21.19■□□□□ 0.98
PTK7-208ENST00000470019 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
PTK7-208ENST00000470019 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
PTK7-208ENST00000470019 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
PTK7-208ENST00000470019 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
PTK7-208ENST00000470019 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
PTK7-208ENST00000470019 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
PTK7-208ENST00000470019 HIRIP3Q9BW71 556 aaPredicted RBP21.09■□□□□ 0.97
PTK7-208ENST00000470019 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
PTK7-208ENST00000470019 RRP7BPQ9NSQ0 103 aa21.07■□□□□ 0.96
PTK7-208ENST00000470019 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
PTK7-208ENST00000470019 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
PTK7-208ENST00000470019 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
PTK7-208ENST00000470019 MIER1Q8N108 512 aa21■□□□□ 0.95
PTK7-208ENST00000470019 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
PTK7-208ENST00000470019 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
PTK7-208ENST00000470019 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
PTK7-208ENST00000470019 IGF1RP08069 1367 aa20.98■□□□□ 0.95
PTK7-208ENST00000470019 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
PTK7-208ENST00000470019 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
PTK7-208ENST00000470019 DDX10Q13206 875 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms