RNA–Protein interactions for RNA: ENST00000469781.5

C1orf35-203, Transcript of chromosome 1 open reading frame 35, humanhuman

TSL 2

Gene C1orf35, Length 2,256 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-203ENST00000469781 NISCHQ9Y2I1 1504 aa44.39■■■■■ 4.7
C1orf35-203ENST00000469781 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
C1orf35-203ENST00000469781 ZCCHC6Q5VYS8 1495 aaKnown RBP37.51■■■■□ 3.6
C1orf35-203ENST00000469781 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
C1orf35-203ENST00000469781 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
C1orf35-203ENST00000469781 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
C1orf35-203ENST00000469781 DCAF1Q9Y4B6 1507 aa36.53■■■■□ 3.44
C1orf35-203ENST00000469781 ABCC9O60706 1549 aa36.28■■■■□ 3.4
C1orf35-203ENST00000469781 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
C1orf35-203ENST00000469781 NACADO15069 1562 aa35.61■■■■□ 3.29
C1orf35-203ENST00000469781 CHIC1Q5VXU3 224 aa35.54■■■■□ 3.28
C1orf35-203ENST00000469781 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
C1orf35-203ENST00000469781 RB1CC1Q8TDY2 1594 aa35.32■■■■□ 3.24
C1orf35-203ENST00000469781 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
C1orf35-203ENST00000469781 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
C1orf35-203ENST00000469781 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
C1orf35-203ENST00000469781 MROH2BQ7Z745 1585 aa34.43■■■■□ 3.1
C1orf35-203ENST00000469781 LOC105371045A0A1W2PR82 267 aa34.38■■■■□ 3.09
C1orf35-203ENST00000469781 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
C1orf35-203ENST00000469781 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
C1orf35-203ENST00000469781 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
C1orf35-203ENST00000469781 WIZO95785 1651 aa34.22■■■■□ 3.07
C1orf35-203ENST00000469781 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
C1orf35-203ENST00000469781 PCGF6Q9BYE7 350 aa34.13■■■■□ 3.05
C1orf35-203ENST00000469781 HRCP23327 699 aa34■■■■□ 3.03
C1orf35-203ENST00000469781 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
C1orf35-203ENST00000469781 FAM9AQ8IZU1 332 aaPredicted RBP33.83■■■■□ 3.01
C1orf35-203ENST00000469781 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
C1orf35-203ENST00000469781 EIF4G1Q04637 1599 aaKnown RBP33.7■■■□□ 2.98
C1orf35-203ENST00000469781 TRIM26Q12899 539 aaPredicted RBP33.65■■■□□ 2.98
C1orf35-203ENST00000469781 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.96
C1orf35-203ENST00000469781 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
C1orf35-203ENST00000469781 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
C1orf35-203ENST00000469781 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
C1orf35-203ENST00000469781 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
C1orf35-203ENST00000469781 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
C1orf35-203ENST00000469781 PPARGC1BQ86YN6 1023 aaKnown RBP33.19■■■□□ 2.9
C1orf35-203ENST00000469781 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
C1orf35-203ENST00000469781 SOGA1O94964 1423 aa32.98■■■□□ 2.87
C1orf35-203ENST00000469781 EEA1Q15075 1411 aa32.96■■■□□ 2.87
C1orf35-203ENST00000469781 WRNQ14191 1432 aaPredicted RBP eCLIP32.91■■■□□ 2.86
C1orf35-203ENST00000469781 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
C1orf35-203ENST00000469781 ZEB1P37275 1124 aaPredicted RBP32.88■■■□□ 2.85
C1orf35-203ENST00000469781 CSRNP3Q8WYN3 585 aa32.83■■■□□ 2.85
C1orf35-203ENST00000469781 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
C1orf35-203ENST00000469781 RUSC2Q8N2Y8 1516 aa32.79■■■□□ 2.84
C1orf35-203ENST00000469781 TNIKQ9UKE5 1360 aa32.78■■■□□ 2.84
C1orf35-203ENST00000469781 CEP162Q5TB80 1403 aa32.76■■■□□ 2.84
C1orf35-203ENST00000469781 CC2D2AQ9P2K1 1620 aa32.75■■■□□ 2.83
C1orf35-203ENST00000469781 SYNJ1O43426 1573 aa32.71■■■□□ 2.83
C1orf35-203ENST00000469781 GOLGA3Q08378 1498 aa32.66■■■□□ 2.82
C1orf35-203ENST00000469781 UBTFP17480 764 aaKnown RBP32.65■■■□□ 2.82
C1orf35-203ENST00000469781 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
C1orf35-203ENST00000469781 KIF21BO75037 1637 aa32.46■■■□□ 2.79
C1orf35-203ENST00000469781 TOP2BQ02880 1626 aa32.39■■■□□ 2.78
C1orf35-203ENST00000469781 TTBK1Q5TCY1 1321 aaPredicted RBP32.35■■■□□ 2.77
C1orf35-203ENST00000469781 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
C1orf35-203ENST00000469781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.25■■■□□ 2.75
C1orf35-203ENST00000469781 CCER1Q8TC90 406 aaPredicted RBP32.24■■■□□ 2.75
C1orf35-203ENST00000469781 CLIP1P30622 1438 aa32.23■■■□□ 2.75
C1orf35-203ENST00000469781 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
C1orf35-203ENST00000469781 CFTRP13569 1480 aa32.19■■■□□ 2.74
C1orf35-203ENST00000469781 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
C1orf35-203ENST00000469781 CUX1P39880 1505 aa32.09■■■□□ 2.73
C1orf35-203ENST00000469781 VPS8Q8N3P4 1428 aa32.08■■■□□ 2.73
C1orf35-203ENST00000469781 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
C1orf35-203ENST00000469781 ERICH3Q5RHP9 1530 aa32.01■■■□□ 2.72
C1orf35-203ENST00000469781 PRXQ9BXM0 1461 aa31.99■■■□□ 2.71
C1orf35-203ENST00000469781 RANGAP1P46060 587 aaPredicted RBP31.95■■■□□ 2.71
C1orf35-203ENST00000469781 KIF27Q86VH2 1401 aa31.95■■■□□ 2.7
C1orf35-203ENST00000469781 APLP2Q06481 763 aa31.95■■■□□ 2.7
C1orf35-203ENST00000469781 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
C1orf35-203ENST00000469781 NESP48681 1621 aa31.84■■■□□ 2.69
C1orf35-203ENST00000469781 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.67
C1orf35-203ENST00000469781 LAMC3Q9Y6N6 1575 aa31.75■■■□□ 2.67
C1orf35-203ENST00000469781 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
C1orf35-203ENST00000469781 HNRNPUL2Q1KMD3 747 aaKnown RBP31.7■■■□□ 2.67
C1orf35-203ENST00000469781 CUX2O14529 1486 aa31.65■■■□□ 2.66
C1orf35-203ENST00000469781 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
C1orf35-203ENST00000469781 FGD5Q6ZNL6 1462 aa31.58■■■□□ 2.65
C1orf35-203ENST00000469781 IGF1RP08069 1367 aa31.56■■■□□ 2.64
C1orf35-203ENST00000469781 ARHGAP35Q9NRY4 1499 aa31.5■■■□□ 2.63
C1orf35-203ENST00000469781 CARMIL1Q5VZK9 1371 aa31.45■■■□□ 2.62
C1orf35-203ENST00000469781 KANK4Q5T7N3 995 aaPredicted RBP31.44■■■□□ 2.62
C1orf35-203ENST00000469781 DIEXFQ68CQ4 756 aaKnown RBP31.43■■■□□ 2.62
C1orf35-203ENST00000469781 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
C1orf35-203ENST00000469781 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
C1orf35-203ENST00000469781 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
C1orf35-203ENST00000469781 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
C1orf35-203ENST00000469781 ZNF316A6NFI3 1004 aaPredicted RBP31.31■■■□□ 2.6
C1orf35-203ENST00000469781 RRBP1Q9P2E9 1410 aaKnown RBP31.29■■■□□ 2.6
C1orf35-203ENST00000469781 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.59
C1orf35-203ENST00000469781 ABCA10Q8WWZ4 1543 aa31.25■■■□□ 2.59
C1orf35-203ENST00000469781 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
C1orf35-203ENST00000469781 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
C1orf35-203ENST00000469781 MAP3K1Q13233 1512 aa31.16■■■□□ 2.58
C1orf35-203ENST00000469781 CLSPNQ9HAW4 1339 aa31.15■■■□□ 2.58
C1orf35-203ENST00000469781 TIAM1Q13009 1591 aa31.14■■■□□ 2.58
C1orf35-203ENST00000469781 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.57
C1orf35-203ENST00000469781 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms