RNA–Protein interactions for RNA: ENST00000468820.1

GSDMB-207, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 369 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-207ENST00000468820 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
GSDMB-207ENST00000468820 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
GSDMB-207ENST00000468820 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
GSDMB-207ENST00000468820 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
GSDMB-207ENST00000468820 FOXD1Q16676 465 aa18.8■□□□□ 0.6
GSDMB-207ENST00000468820 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
GSDMB-207ENST00000468820 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
GSDMB-207ENST00000468820 ADRA2BP18089 450 aa17.88■□□□□ 0.45
GSDMB-207ENST00000468820 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
GSDMB-207ENST00000468820 MSH5O43196 834 aa17.38■□□□□ 0.37
GSDMB-207ENST00000468820 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
GSDMB-207ENST00000468820 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
GSDMB-207ENST00000468820 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
GSDMB-207ENST00000468820 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
GSDMB-207ENST00000468820 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
GSDMB-207ENST00000468820 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
GSDMB-207ENST00000468820 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
GSDMB-207ENST00000468820 KCNA4P22459 653 aa15.67■□□□□ 0.1
GSDMB-207ENST00000468820 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
GSDMB-207ENST00000468820 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
GSDMB-207ENST00000468820 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
GSDMB-207ENST00000468820 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
GSDMB-207ENST00000468820 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
GSDMB-207ENST00000468820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■■□□ 19
GSDMB-207ENST00000468820 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
GSDMB-207ENST00000468820 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
GSDMB-207ENST00000468820 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
GSDMB-207ENST00000468820 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
GSDMB-207ENST00000468820 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
GSDMB-207ENST00000468820 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
GSDMB-207ENST00000468820 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
GSDMB-207ENST00000468820 ZBTB22O15209 634 aa14.42□□□□□ -0.1
GSDMB-207ENST00000468820 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
GSDMB-207ENST00000468820 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
GSDMB-207ENST00000468820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
GSDMB-207ENST00000468820 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
GSDMB-207ENST00000468820 CAPN15O75808 1086 aa14.28□□□□□ -0.12
GSDMB-207ENST00000468820 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
GSDMB-207ENST00000468820 APLP2Q06481 763 aa14.22□□□□□ -0.13
GSDMB-207ENST00000468820 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
GSDMB-207ENST00000468820 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
GSDMB-207ENST00000468820 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
GSDMB-207ENST00000468820 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
GSDMB-207ENST00000468820 DSG3P32926 999 aa14.09□□□□□ -0.15
GSDMB-207ENST00000468820 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
GSDMB-207ENST00000468820 ABCB7O75027 752 aa14.02□□□□□ -0.17
GSDMB-207ENST00000468820 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
GSDMB-207ENST00000468820 POLA2Q14181 598 aa13.86□□□□□ -0.19
GSDMB-207ENST00000468820 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
GSDMB-207ENST00000468820 FBLN2P98095 1184 aa13.43□□□□□ -0.26
GSDMB-207ENST00000468820 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
GSDMB-207ENST00000468820 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
GSDMB-207ENST00000468820 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
GSDMB-207ENST00000468820 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
GSDMB-207ENST00000468820 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
GSDMB-207ENST00000468820 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
GSDMB-207ENST00000468820 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
GSDMB-207ENST00000468820 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
GSDMB-207ENST00000468820 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
GSDMB-207ENST00000468820 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
GSDMB-207ENST00000468820 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
GSDMB-207ENST00000468820 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
GSDMB-207ENST00000468820 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
GSDMB-207ENST00000468820 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.332e-7■□□□□ 10.5
GSDMB-207ENST00000468820 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
GSDMB-207ENST00000468820 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
GSDMB-207ENST00000468820 POTEHQ6S545 545 aa12.86□□□□□ -0.35
GSDMB-207ENST00000468820 FKBP8Q14318 412 aa12.78□□□□□ -0.36
GSDMB-207ENST00000468820 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
GSDMB-207ENST00000468820 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
GSDMB-207ENST00000468820 PROM2Q8N271 834 aa12.72□□□□□ -0.37
GSDMB-207ENST00000468820 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
GSDMB-207ENST00000468820 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
GSDMB-207ENST00000468820 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
GSDMB-207ENST00000468820 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
GSDMB-207ENST00000468820 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
GSDMB-207ENST00000468820 HAX1O00165 279 aa12.43□□□□□ -0.42
GSDMB-207ENST00000468820 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
GSDMB-207ENST00000468820 MIER1Q8N108 512 aa12.34□□□□□ -0.43
GSDMB-207ENST00000468820 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-207ENST00000468820 EVX2Q03828 476 aa12.33□□□□□ -0.44
GSDMB-207ENST00000468820 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
GSDMB-207ENST00000468820 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
GSDMB-207ENST00000468820 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
GSDMB-207ENST00000468820 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
GSDMB-207ENST00000468820 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
GSDMB-207ENST00000468820 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
GSDMB-207ENST00000468820 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
GSDMB-207ENST00000468820 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
GSDMB-207ENST00000468820 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
GSDMB-207ENST00000468820 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
GSDMB-207ENST00000468820 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
GSDMB-207ENST00000468820 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
GSDMB-207ENST00000468820 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-207ENST00000468820 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
GSDMB-207ENST00000468820 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
GSDMB-207ENST00000468820 GABBR2O75899 941 aa12.05□□□□□ -0.48
GSDMB-207ENST00000468820 NUBP1P53384 320 aa12.05□□□□□ -0.48
GSDMB-207ENST00000468820 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
GSDMB-207ENST00000468820 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms