RNA–Protein interactions for RNA: ENST00000468289.1

RNF13-209, Transcript of ring finger protein 13, humanhuman

TSL 2

Gene RNF13, Length 820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-209ENST00000468289 AEBP2Q6ZN18 517 aaPredicted RBP30.55■■■□□ 2.48
RNF13-209ENST00000468289 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
RNF13-209ENST00000468289 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
RNF13-209ENST00000468289 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
RNF13-209ENST00000468289 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
RNF13-209ENST00000468289 FOXD1Q16676 465 aa24.04■■□□□ 1.44
RNF13-209ENST00000468289 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
RNF13-209ENST00000468289 ADRA2BP18089 450 aa23.07■■□□□ 1.28
RNF13-209ENST00000468289 PIAS4Q8N2W9 510 aaPredicted RBP22.59■■□□□ 1.21
RNF13-209ENST00000468289 MSH5O43196 834 aa22.11■■□□□ 1.13
RNF13-209ENST00000468289 PPP4R3CPQ6ZMV5 832 aa21.22■□□□□ 0.99
RNF13-209ENST00000468289 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
RNF13-209ENST00000468289 MAPK8IP2Q13387 824 aaPredicted RBP20.98■□□□□ 0.95
RNF13-209ENST00000468289 KCNA4P22459 653 aa20.7■□□□□ 0.9
RNF13-209ENST00000468289 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
RNF13-209ENST00000468289 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
RNF13-209ENST00000468289 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
RNF13-209ENST00000468289 NPM3O75607 178 aaKnown RBP20.37■□□□□ 0.85
RNF13-209ENST00000468289 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
RNF13-209ENST00000468289 RNF216Q9NWF9 866 aaPredicted RBP20.24■□□□□ 0.83
RNF13-209ENST00000468289 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
RNF13-209ENST00000468289 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
RNF13-209ENST00000468289 DCAF8L1A6NGE4 600 aa19.67■□□□□ 0.74
RNF13-209ENST00000468289 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
RNF13-209ENST00000468289 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
RNF13-209ENST00000468289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.66
RNF13-209ENST00000468289 ZBTB22O15209 634 aa19.09■□□□□ 0.65
RNF13-209ENST00000468289 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
RNF13-209ENST00000468289 FOXD4L1Q9NU39 408 aa19.01■□□□□ 0.63
RNF13-209ENST00000468289 RNF39Q9H2S5 420 aa19■□□□□ 0.63
RNF13-209ENST00000468289 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
RNF13-209ENST00000468289 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
RNF13-209ENST00000468289 MYCNP04198 464 aaPredicted RBP18.76■□□□□ 0.59
RNF13-209ENST00000468289 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
RNF13-209ENST00000468289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
RNF13-209ENST00000468289 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
RNF13-209ENST00000468289 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
RNF13-209ENST00000468289 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
RNF13-209ENST00000468289 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
RNF13-209ENST00000468289 ATF5Q9Y2D1 282 aaPredicted RBP18.38■□□□□ 0.53
RNF13-209ENST00000468289 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
RNF13-209ENST00000468289 APLP2Q06481 763 aa18.34■□□□□ 0.53
RNF13-209ENST00000468289 CAPN15O75808 1086 aa18.29■□□□□ 0.52
RNF13-209ENST00000468289 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
RNF13-209ENST00000468289 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
RNF13-209ENST00000468289 DSG3P32926 999 aa18.06■□□□□ 0.48
RNF13-209ENST00000468289 ABCB7O75027 752 aa17.97■□□□□ 0.47
RNF13-209ENST00000468289 POLA2Q14181 598 aa17.93■□□□□ 0.46
RNF13-209ENST00000468289 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
RNF13-209ENST00000468289 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
RNF13-209ENST00000468289 FBLN2P98095 1184 aa17.46■□□□□ 0.39
RNF13-209ENST00000468289 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
RNF13-209ENST00000468289 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
RNF13-209ENST00000468289 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
RNF13-209ENST00000468289 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
RNF13-209ENST00000468289 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
RNF13-209ENST00000468289 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
RNF13-209ENST00000468289 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
RNF13-209ENST00000468289 FKBP8Q14318 412 aa17.03■□□□□ 0.32
RNF13-209ENST00000468289 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
RNF13-209ENST00000468289 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
RNF13-209ENST00000468289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF13-209ENST00000468289 PROM2Q8N271 834 aa16.83■□□□□ 0.28
RNF13-209ENST00000468289 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
RNF13-209ENST00000468289 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
RNF13-209ENST00000468289 SPDYE1Q8NFV5 336 aaPredicted RBP16.6■□□□□ 0.25
RNF13-209ENST00000468289 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
RNF13-209ENST00000468289 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
RNF13-209ENST00000468289 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
RNF13-209ENST00000468289 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
RNF13-209ENST00000468289 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
RNF13-209ENST00000468289 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
RNF13-209ENST00000468289 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
RNF13-209ENST00000468289 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
RNF13-209ENST00000468289 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
RNF13-209ENST00000468289 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
RNF13-209ENST00000468289 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
RNF13-209ENST00000468289 MIER1Q8N108 512 aa16.17■□□□□ 0.18
RNF13-209ENST00000468289 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
RNF13-209ENST00000468289 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
RNF13-209ENST00000468289 POTEHQ6S545 545 aa16.04■□□□□ 0.16
RNF13-209ENST00000468289 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
RNF13-209ENST00000468289 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
RNF13-209ENST00000468289 PLEKHG5O94827 1062 aa16■□□□□ 0.15
RNF13-209ENST00000468289 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
RNF13-209ENST00000468289 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
RNF13-209ENST00000468289 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
RNF13-209ENST00000468289 NUBP1P53384 320 aa15.83■□□□□ 0.12
RNF13-209ENST00000468289 SPOCK2Q92563 424 aa15.79■□□□□ 0.12
RNF13-209ENST00000468289 C19orf67A6NJJ6 358 aa15.77■□□□□ 0.12
RNF13-209ENST00000468289 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
RNF13-209ENST00000468289 HAX1O00165 279 aa15.73■□□□□ 0.11
RNF13-209ENST00000468289 EVX2Q03828 476 aa15.71■□□□□ 0.11
RNF13-209ENST00000468289 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
RNF13-209ENST00000468289 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
RNF13-209ENST00000468289 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
RNF13-209ENST00000468289 FAM212AQ96EL1 285 aa15.6■□□□□ 0.09
RNF13-209ENST00000468289 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
RNF13-209ENST00000468289 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
RNF13-209ENST00000468289 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms