RNA–Protein interactions for RNA: ENST00000467810.1

TPR-203, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-203ENST00000467810 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
TPR-203ENST00000467810 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
TPR-203ENST00000467810 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
TPR-203ENST00000467810 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
TPR-203ENST00000467810 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
TPR-203ENST00000467810 FOXD1Q16676 465 aa14.77□□□□□ -0.05
TPR-203ENST00000467810 ADRA2BP18089 450 aa14.27□□□□□ -0.13
TPR-203ENST00000467810 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
TPR-203ENST00000467810 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
TPR-203ENST00000467810 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
TPR-203ENST00000467810 MSH5O43196 834 aa13.6□□□□□ -0.23
TPR-203ENST00000467810 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
TPR-203ENST00000467810 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
TPR-203ENST00000467810 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
TPR-203ENST00000467810 KCNA4P22459 653 aa12.89□□□□□ -0.35
TPR-203ENST00000467810 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
TPR-203ENST00000467810 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
TPR-203ENST00000467810 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
TPR-203ENST00000467810 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
TPR-203ENST00000467810 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
TPR-203ENST00000467810 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
TPR-203ENST00000467810 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
TPR-203ENST00000467810 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
TPR-203ENST00000467810 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
TPR-203ENST00000467810 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
TPR-203ENST00000467810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.58e-8■■■■□ 21.6
TPR-203ENST00000467810 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
TPR-203ENST00000467810 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
TPR-203ENST00000467810 ZBTB22O15209 634 aa11.83□□□□□ -0.52
TPR-203ENST00000467810 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
TPR-203ENST00000467810 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
TPR-203ENST00000467810 RNF39Q9H2S5 420 aa11.67□□□□□ -0.54
TPR-203ENST00000467810 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
TPR-203ENST00000467810 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
TPR-203ENST00000467810 NISCHQ9Y2I1 1504 aa11.58□□□□□ -0.56
TPR-203ENST00000467810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
TPR-203ENST00000467810 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
TPR-203ENST00000467810 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
TPR-203ENST00000467810 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
TPR-203ENST00000467810 APLP2Q06481 763 aa11.43□□□□□ -0.58
TPR-203ENST00000467810 CAPN15O75808 1086 aa11.41□□□□□ -0.58
TPR-203ENST00000467810 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
TPR-203ENST00000467810 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
TPR-203ENST00000467810 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
TPR-203ENST00000467810 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
TPR-203ENST00000467810 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
TPR-203ENST00000467810 ABCB7O75027 752 aa11.2□□□□□ -0.62
TPR-203ENST00000467810 POLA2Q14181 598 aa11.13□□□□□ -0.63
TPR-203ENST00000467810 DSG3P32926 999 aa11.11□□□□□ -0.63
TPR-203ENST00000467810 FBLN2P98095 1184 aa10.92□□□□□ -0.66
TPR-203ENST00000467810 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
TPR-203ENST00000467810 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
TPR-203ENST00000467810 POTEHQ6S545 545 aa10.79□□□□□ -0.68
TPR-203ENST00000467810 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
TPR-203ENST00000467810 FKBP8Q14318 412 aa10.73□□□□□ -0.69
TPR-203ENST00000467810 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
TPR-203ENST00000467810 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
TPR-203ENST00000467810 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
TPR-203ENST00000467810 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
TPR-203ENST00000467810 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
TPR-203ENST00000467810 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
TPR-203ENST00000467810 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.732e-9■□□□□ 11.1
TPR-203ENST00000467810 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
TPR-203ENST00000467810 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
TPR-203ENST00000467810 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
TPR-203ENST00000467810 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
TPR-203ENST00000467810 PROM2Q8N271 834 aa10.34□□□□□ -0.75
TPR-203ENST00000467810 SPDYE1Q8NFV5 336 aaPredicted RBP10.31□□□□□ -0.76
TPR-203ENST00000467810 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
TPR-203ENST00000467810 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
TPR-203ENST00000467810 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
TPR-203ENST00000467810 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
TPR-203ENST00000467810 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
TPR-203ENST00000467810 PLCD3Q8N3E9 789 aa10.16□□□□□ -0.78
TPR-203ENST00000467810 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
TPR-203ENST00000467810 MIER1Q8N108 512 aa10.15□□□□□ -0.78
TPR-203ENST00000467810 CCDC180Q9P1Z9 1646 aa10.15□□□□□ -0.79
TPR-203ENST00000467810 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
TPR-203ENST00000467810 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
TPR-203ENST00000467810 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
TPR-203ENST00000467810 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
TPR-203ENST00000467810 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
TPR-203ENST00000467810 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
TPR-203ENST00000467810 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.815e-8■■□□□ 13.4
TPR-203ENST00000467810 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
TPR-203ENST00000467810 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
TPR-203ENST00000467810 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
TPR-203ENST00000467810 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
TPR-203ENST00000467810 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
TPR-203ENST00000467810 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
TPR-203ENST00000467810 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
TPR-203ENST00000467810 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
TPR-203ENST00000467810 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
TPR-203ENST00000467810 NUBP1P53384 320 aa9.79□□□□□ -0.84
TPR-203ENST00000467810 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
TPR-203ENST00000467810 HAX1O00165 279 aa9.78□□□□□ -0.84
TPR-203ENST00000467810 FAM212AQ96EL1 285 aa9.78□□□□□ -0.84
TPR-203ENST00000467810 ZCCHC6Q5VYS8 1495 aaKnown RBP9.78□□□□□ -0.84
TPR-203ENST00000467810 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.85
TPR-203ENST00000467810 CD44P16070 742 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms