RNA–Protein interactions for RNA: ENST00000467792.1

PSMD1-208, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 444 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-208ENST00000467792 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
PSMD1-208ENST00000467792 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
PSMD1-208ENST00000467792 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
PSMD1-208ENST00000467792 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PSMD1-208ENST00000467792 FOXD1Q16676 465 aa16.75■□□□□ 0.27
PSMD1-208ENST00000467792 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
PSMD1-208ENST00000467792 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
PSMD1-208ENST00000467792 ADRA2BP18089 450 aa16.01■□□□□ 0.15
PSMD1-208ENST00000467792 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
PSMD1-208ENST00000467792 MSH5O43196 834 aa15.36■□□□□ 0.05
PSMD1-208ENST00000467792 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
PSMD1-208ENST00000467792 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
PSMD1-208ENST00000467792 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
PSMD1-208ENST00000467792 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
PSMD1-208ENST00000467792 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
PSMD1-208ENST00000467792 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
PSMD1-208ENST00000467792 KCNA4P22459 653 aa14.08□□□□□ -0.16
PSMD1-208ENST00000467792 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
PSMD1-208ENST00000467792 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
PSMD1-208ENST00000467792 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
PSMD1-208ENST00000467792 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
PSMD1-208ENST00000467792 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
PSMD1-208ENST00000467792 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
PSMD1-208ENST00000467792 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
PSMD1-208ENST00000467792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
PSMD1-208ENST00000467792 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
PSMD1-208ENST00000467792 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
PSMD1-208ENST00000467792 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PSMD1-208ENST00000467792 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
PSMD1-208ENST00000467792 ZBTB22O15209 634 aa13.01□□□□□ -0.33
PSMD1-208ENST00000467792 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
PSMD1-208ENST00000467792 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
PSMD1-208ENST00000467792 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
PSMD1-208ENST00000467792 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
PSMD1-208ENST00000467792 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
PSMD1-208ENST00000467792 CAPN15O75808 1086 aa12.72□□□□□ -0.37
PSMD1-208ENST00000467792 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
PSMD1-208ENST00000467792 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
PSMD1-208ENST00000467792 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
PSMD1-208ENST00000467792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
PSMD1-208ENST00000467792 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
PSMD1-208ENST00000467792 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
PSMD1-208ENST00000467792 ABCB7O75027 752 aa12.55□□□□□ -0.4
PSMD1-208ENST00000467792 DSG3P32926 999 aa12.55□□□□□ -0.4
PSMD1-208ENST00000467792 APLP2Q06481 763 aa12.51□□□□□ -0.41
PSMD1-208ENST00000467792 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
PSMD1-208ENST00000467792 POLA2Q14181 598 aa12.37□□□□□ -0.43
PSMD1-208ENST00000467792 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
PSMD1-208ENST00000467792 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
PSMD1-208ENST00000467792 OSCARQ8IYS5 282 aa12□□□□□ -0.49
PSMD1-208ENST00000467792 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
PSMD1-208ENST00000467792 FBLN2P98095 1184 aa11.91□□□□□ -0.5
PSMD1-208ENST00000467792 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
PSMD1-208ENST00000467792 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
PSMD1-208ENST00000467792 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
PSMD1-208ENST00000467792 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
PSMD1-208ENST00000467792 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
PSMD1-208ENST00000467792 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
PSMD1-208ENST00000467792 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
PSMD1-208ENST00000467792 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
PSMD1-208ENST00000467792 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
PSMD1-208ENST00000467792 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
PSMD1-208ENST00000467792 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
PSMD1-208ENST00000467792 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
PSMD1-208ENST00000467792 FKBP8Q14318 412 aa11.49□□□□□ -0.57
PSMD1-208ENST00000467792 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
PSMD1-208ENST00000467792 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
PSMD1-208ENST00000467792 POTEHQ6S545 545 aa11.38□□□□□ -0.59
PSMD1-208ENST00000467792 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
PSMD1-208ENST00000467792 PROM2Q8N271 834 aa11.35□□□□□ -0.59
PSMD1-208ENST00000467792 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■■■□ 26.3
PSMD1-208ENST00000467792 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
PSMD1-208ENST00000467792 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
PSMD1-208ENST00000467792 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
PSMD1-208ENST00000467792 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
PSMD1-208ENST00000467792 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
PSMD1-208ENST00000467792 EVX2Q03828 476 aa11.06□□□□□ -0.64
PSMD1-208ENST00000467792 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
PSMD1-208ENST00000467792 HAX1O00165 279 aa11.03□□□□□ -0.64
PSMD1-208ENST00000467792 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PSMD1-208ENST00000467792 MIER1Q8N108 512 aa11.02□□□□□ -0.65
PSMD1-208ENST00000467792 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
PSMD1-208ENST00000467792 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
PSMD1-208ENST00000467792 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
PSMD1-208ENST00000467792 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
PSMD1-208ENST00000467792 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
PSMD1-208ENST00000467792 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
PSMD1-208ENST00000467792 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
PSMD1-208ENST00000467792 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
PSMD1-208ENST00000467792 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
PSMD1-208ENST00000467792 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
PSMD1-208ENST00000467792 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
PSMD1-208ENST00000467792 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
PSMD1-208ENST00000467792 NUBP1P53384 320 aa10.79□□□□□ -0.68
PSMD1-208ENST00000467792 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
PSMD1-208ENST00000467792 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
PSMD1-208ENST00000467792 GABBR2O75899 941 aa10.72□□□□□ -0.69
PSMD1-208ENST00000467792 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
PSMD1-208ENST00000467792 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
PSMD1-208ENST00000467792 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms