RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
USP9X-206ENST00000467173 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
USP9X-206ENST00000467173 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
USP9X-206ENST00000467173 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
USP9X-206ENST00000467173 FOXD1Q16676 465 aa24.05■■□□□ 1.44
USP9X-206ENST00000467173 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
USP9X-206ENST00000467173 POTEDQ86YR6 584 aa22.66■■□□□ 1.22
USP9X-206ENST00000467173 MSH5O43196 834 aa22.61■■□□□ 1.21
USP9X-206ENST00000467173 PIAS4Q8N2W9 510 aaPredicted RBP22.53■■□□□ 1.2
USP9X-206ENST00000467173 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
USP9X-206ENST00000467173 ADRA2BP18089 450 aa22.42■■□□□ 1.18
USP9X-206ENST00000467173 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
USP9X-206ENST00000467173 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
USP9X-206ENST00000467173 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
USP9X-206ENST00000467173 PPP4R3CPQ6ZMV5 832 aa20.2■□□□□ 0.82
USP9X-206ENST00000467173 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
USP9X-206ENST00000467173 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
USP9X-206ENST00000467173 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
USP9X-206ENST00000467173 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
USP9X-206ENST00000467173 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
USP9X-206ENST00000467173 CACNB1Q02641 598 aaPredicted RBP19.33■□□□□ 0.68
USP9X-206ENST00000467173 RNF39Q9H2S5 420 aa19.23■□□□□ 0.67
USP9X-206ENST00000467173 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
USP9X-206ENST00000467173 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
USP9X-206ENST00000467173 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
USP9X-206ENST00000467173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
USP9X-206ENST00000467173 KCNA4P22459 653 aa18.79■□□□□ 0.6
USP9X-206ENST00000467173 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
USP9X-206ENST00000467173 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
USP9X-206ENST00000467173 CAPN15O75808 1086 aa18.15■□□□□ 0.5
USP9X-206ENST00000467173 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
USP9X-206ENST00000467173 APLP2Q06481 763 aa18.1■□□□□ 0.49
USP9X-206ENST00000467173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
USP9X-206ENST00000467173 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
USP9X-206ENST00000467173 DSG3P32926 999 aa18■□□□□ 0.47
USP9X-206ENST00000467173 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
USP9X-206ENST00000467173 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
USP9X-206ENST00000467173 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
USP9X-206ENST00000467173 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
USP9X-206ENST00000467173 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
USP9X-206ENST00000467173 ABCB7O75027 752 aa17.68■□□□□ 0.42
USP9X-206ENST00000467173 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
USP9X-206ENST00000467173 POTEHQ6S545 545 aa17.57■□□□□ 0.4
USP9X-206ENST00000467173 POLA2Q14181 598 aa17.39■□□□□ 0.37
USP9X-206ENST00000467173 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
USP9X-206ENST00000467173 ZBTB22O15209 634 aa17.23■□□□□ 0.35
USP9X-206ENST00000467173 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
USP9X-206ENST00000467173 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
USP9X-206ENST00000467173 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
USP9X-206ENST00000467173 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
USP9X-206ENST00000467173 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
USP9X-206ENST00000467173 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
USP9X-206ENST00000467173 FBLN2P98095 1184 aa16.72■□□□□ 0.27
USP9X-206ENST00000467173 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
USP9X-206ENST00000467173 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
USP9X-206ENST00000467173 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
USP9X-206ENST00000467173 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
USP9X-206ENST00000467173 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
USP9X-206ENST00000467173 PITPNM1O00562 1244 aa16.46■□□□□ 0.23
USP9X-206ENST00000467173 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
USP9X-206ENST00000467173 PIP4P2Q8N4L2 257 aa16.4■□□□□ 0.22
USP9X-206ENST00000467173 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
USP9X-206ENST00000467173 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.22e-9■■■□□ 15.4
USP9X-206ENST00000467173 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
USP9X-206ENST00000467173 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
USP9X-206ENST00000467173 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
USP9X-206ENST00000467173 CLEC11AQ9Y240 323 aa16.19■□□□□ 0.18
USP9X-206ENST00000467173 SP7Q8TDD2 431 aaPredicted RBP16.15■□□□□ 0.18
USP9X-206ENST00000467173 HAX1O00165 279 aa16.13■□□□□ 0.17
USP9X-206ENST00000467173 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP9X-206ENST00000467173 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
USP9X-206ENST00000467173 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
USP9X-206ENST00000467173 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
USP9X-206ENST00000467173 EVX2Q03828 476 aa15.81■□□□□ 0.12
USP9X-206ENST00000467173 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
USP9X-206ENST00000467173 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
USP9X-206ENST00000467173 STAG3Q9UJ98 1225 aa15.77■□□□□ 0.12
USP9X-206ENST00000467173 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
USP9X-206ENST00000467173 CD44P16070 742 aaKnown RBP15.56■□□□□ 0.08
USP9X-206ENST00000467173 GABBR2O75899 941 aa15.54■□□□□ 0.08
USP9X-206ENST00000467173 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
USP9X-206ENST00000467173 CLCN6P51797 869 aa15.48■□□□□ 0.07
USP9X-206ENST00000467173 PROM2Q8N271 834 aa15.4■□□□□ 0.06
USP9X-206ENST00000467173 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP9X-206ENST00000467173 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
USP9X-206ENST00000467173 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
USP9X-206ENST00000467173 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
USP9X-206ENST00000467173 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
USP9X-206ENST00000467173 DCBLD2Q96PD2 775 aa15.2■□□□□ 0.02
USP9X-206ENST00000467173 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
USP9X-206ENST00000467173 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
USP9X-206ENST00000467173 LHX8Q68G74 356 aa15.15■□□□□ 0.02
USP9X-206ENST00000467173 PHF12Q96QT6 1004 aa15.08■□□□□ 0
USP9X-206ENST00000467173 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
USP9X-206ENST00000467173 MIER1Q8N108 512 aa15.07■□□□□ 0
USP9X-206ENST00000467173 FKBP8Q14318 412 aa15□□□□□ -0.01
USP9X-206ENST00000467173 TSPYL2Q9H2G4 693 aaPredicted RBP14.98□□□□□ -0.01
USP9X-206ENST00000467173 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
USP9X-206ENST00000467173 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
USP9X-206ENST00000467173 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms